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The challenge of robust trait estimates with deep learning on high resolution RGB images / Etienne David (2021)
Titre : The challenge of robust trait estimates with deep learning on high resolution RGB images Type de document : Thèse/HDR Auteurs : Etienne David, Auteur ; Frédéric Baret, Directeur de thèse Editeur : Avignon : Université d'Avignon Année de publication : 2021 Importance : 145 p. Format : 21 x 30 cm Note générale : bibliographie
Thèse de Doctorat de l'Université d'Avignon, spécialité Sciences AgronomiquesLangues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection
[Termes IGN] apprentissage profond
[Termes IGN] base de données d'images
[Termes IGN] blé (céréale)
[Termes IGN] céréales
[Termes IGN] comptage
[Termes IGN] cultures
[Termes IGN] densité de la végétation
[Termes IGN] données d'entrainement (apprentissage automatique)
[Termes IGN] image à haute résolution
[Termes IGN] image captée par drone
[Termes IGN] image RVB
[Termes IGN] jeu de données
[Termes IGN] surveillance agricoleIndex. décimale : THESE Thèses et HDR Résumé : (auteur) High throughput plant phenotyping, especially in the context of open field acquisitions, relies on the interpretation of data from different sensors implemented on various vectors such as tractors, robots or drones. Initially, these data were interpreted using remote sensing algorithms that exploit the spatial resolution of the signal. Since 2015, however, progresses of ”Deep Learning”, based on the training on examples, has already obtained promising results for measuring the rate of cover, counting plants or organs. It uses learned convolution layers, can take advantage of the spatial organization of the signal. The advantage of these methods is that they are based on Red-Green-Blue (RGB) sensors, which are much less expensive than multi- or hyperspectral imagers. However, these methods are sensitive to changes in the distribution between the data used in training and the predicted data. In practice, variable prediction errors from site to site can be observed using these methods. The objective of the thesis is to understand the causes of these variations and propose solutions for reliable phenotypic trait estimates using Deep Learning. The study focuses on detecting plants and organs from high-resolution RGB images acquired in the field. Our work first focused on the constitution of diversified image databases from different locations and stages of development for plant emergence (maize, beet, sunflower) and wheat ears, which allowed the publication of two annotated databases, grouping 27 acquisition sessions for thedrone and 47 for the ear detection. The datasets demonstrate the performances difference between the published results and ours due to the change in distribution. To go beyond the limits of the usual methods, we organized two data competitions, the Global Wheat Challenges, in 2020 and 2021, which allowed us to obtain solutions trained for robustness on a different data set than the training one. The analysis of the solutions showed the importance of the training strategies for robustness beyond the architectures used. We have also shown that these solutions can be effectively deployed as a replacement for manual counting. Finally, we have demonstrated the inefficiency of training functions designed for robust training. Our work opens the prospect of a better evaluation of Deep Learning in the context of high-throughput phenotyping and thus of confidence in its use in real-life conditions. Note de contenu : 1- Introduction
2- Evaluation of the robustness of handcrafted and deep learning methods for plant density estimation
3- Design of a large and diverse dataset for training and evaluating deep learning models: application to wheat head detection
4- Competition design to train robust Deep Learn model: the example of the Global Wheat Challenges
5- GlobalWheat-Wilds: Global Wheat Head Dataset as a benchmark of in-the-wild distribution shifts
6- Conclusion and perspectivesNuméro de notice : 15244 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Thèse française Note de thèse : Thèse de Doctorat : Sciences Agronomiques : Avignon : 2021 Organisme de stage : Laboratoire EMMAH DOI : sans En ligne : https://hal.inrae.fr/tel-03431192v2/document Format de la ressource électronique : URL Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=100610 The use of deep machine learning for the automated selection of remote sensing data for the determination of areas of arable land degradation processes distribution / Dimitri I. Rukhovitch in Remote sensing, vol 13 n° 1 (January-1 2021)
[article]
Titre : The use of deep machine learning for the automated selection of remote sensing data for the determination of areas of arable land degradation processes distribution Type de document : Article/Communication Auteurs : Dimitri I. Rukhovitch, Auteur ; Polina V. Koroleva, Auteur ; Danila D. Rukhovitch, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : n° 155 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection
[Termes IGN] apprentissage profond
[Termes IGN] classification par réseau neuronal convolutif
[Termes IGN] dégradation des sols
[Termes IGN] distribution spatiale
[Termes IGN] érosion
[Termes IGN] image Landsat
[Termes IGN] image Sentinel-MSI
[Termes IGN] Normalized Difference Vegetation Index
[Termes IGN] Russie
[Termes IGN] surface cultivée
[Termes IGN] système d'information géographiqueRésumé : (auteur) Soil degradation processes are widespread on agricultural land. Ground-based methods for detecting degradation require a lot of labor and time. Remote methods based on the analysis of vegetation indices can significantly reduce the volume of ground surveys. Currently, machine learning methods are increasingly being used to analyze remote sensing data. In this paper, the task is set to apply deep machine learning methods and methods of vegetation indices calculation to automate the detection of areas of soil degradation development on arable land. In the course of the work, a method was developed for determining the location of degraded areas of soil cover on arable fields. The method is based on the use of multi-temporal remote sensing data. The selection of suitable remote sensing data scenes is based on deep machine learning. Deep machine learning was based on an analysis of 1028 scenes of Landsats 4, 5, 7 and 8 on 530 agricultural fields. Landsat data from 1984 to 2019 was analyzed. Dataset was created manually for each pair of “Landsat scene”/“agricultural field number”(for each agricultural field, the suitability of each Landsat scene was assessed). Areas of soil degradation were calculated based on the frequency of occurrence of low NDVI values over 35 years. Low NDVI values were calculated separately for each suitable fragment of the satellite image within the boundaries of each agricultural field. NDVI values of one-third of the field area and lower than the other two-thirds were considered low. During testing, the method gave 12.5% of type I errors (false positive) and 3.8% of type II errors (false negative). Independent verification of the method was carried out on six agricultural fields on an area of 713.3 hectares. Humus content and thickness of the humus horizon were determined in 42 ground-based points. In arable land degradation areas identified by the proposed method, the probability of detecting soil degradation by field methods was 87.5%. The probability of detecting soil degradation by ground-based methods outside the predicted regions was 3.8%. The results indicate that deep machine learning is feasible for remote sensing data selection based on a binary dataset. This eliminates the need for intermediate filtering systems in the selection of satellite imagery (determination of clouds, shadows from clouds, open soil surface, etc.). Direct selection of Landsat scenes suitable for calculations has been made. It allows automating the process of constructing soil degradation maps. Numéro de notice : A2021-074 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.3390/rs13010155 Date de publication en ligne : 05/01/2021 En ligne : https://doi.org/10.3390/rs13010155 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=96810
in Remote sensing > vol 13 n° 1 (January-1 2021) . - n° 155[article]Time-series analysis of massive satellite images : Application to earth observation / Alexandre Constantin (2021)
Titre : Time-series analysis of massive satellite images : Application to earth observation Titre original : Analyse de séries temporelles massives d'images satellitaires : Applications à la cartographie des écosystèmes Type de document : Thèse/HDR Auteurs : Alexandre Constantin, Auteur ; Stéphane Girard, Directeur de thèse ; Mathieu Fauvel, Directeur de thèse Editeur : Grenoble [France] : Université Grenoble Alpes Année de publication : 2021 Importance : 136 p. Format : 21 x 30 cm Note générale : bibliographie
Thèse Pour obtenir le grade de Docteur de l'Université de Grenoble Alpes, Specialité : Mathématiques AppliquéesLangues : Anglais (eng) Descripteur : [Vedettes matières IGN] Traitement d'image optique
[Termes IGN] analyse multivariée
[Termes IGN] carte d'occupation du sol
[Termes IGN] classification dirigée
[Termes IGN] classification pixellaire
[Termes IGN] covariance
[Termes IGN] échantillonnage de données
[Termes IGN] écosystème
[Termes IGN] image Sentinel-MSI
[Termes IGN] processus gaussien
[Termes IGN] Python (langage de programmation)
[Termes IGN] régression
[Termes IGN] série temporelleIndex. décimale : THESE Thèses et HDR Résumé : (auteur) This thesis takes place in the context of the processing of the data from Sentinel-2 mission. This mission, initiated by the European Space Agency and launched in 2017, produces an unprecedented amount of Satellite Image Time-Series (SITS). Among the key analyses of these images, this thesis focuses on the classification task, i.e. land use or land cover maps that can be produced using spectro-temporal aspect of the Sentinel-2 SITS.Two main difficulties are identified in this thesis for the process of Sentinel-2 SITS. First, the unprecedented amount of data requires both scalable classifiers and code optimization techniques (such as parallel processing). Second, the acquisition noise (clouds, shadows) combined with the temporal aspect results in irregular and unevenly sampled time-series. Conventional approaches re-sample time-series to a set of time stamps, then they use machine learning techniques to classify vectors at a large-scale (national scale). The main disadvantage of this two-step processing approach is that it increases the number of operations applied to the SITS, implying a more difficult transition to massive amount of data. To a lower extent, the re-sampling step may slightly alter the temporal characteristics of the data.This thesis contributions are the following. We introduce a novel model-based approach with the ability to classify irregularly sampled time-series based on a mixture of multivariate Gaussian processes. A two-step approach has been used, by defining on one hand a model of uni-variate time-series, independent from the spectral wavelength point of view, then by considering on the second hand both spectral and temporal information from SITS. These models allow jointly a reconstruction of unobserved or noisy data. Estimation of both models has been implemented using a parallelized python code to be scalable to large-scale data-sets. The two models are evaluated numerically on Sentinel-2 SITS in terms of classification and reconstruction accuracy and are compared with conventional approaches. Analyses of the results illustrate the relevance of the two models and the benefit of using interpretable parametric models. Note de contenu : General Introduction
1- Satellite image time-series analysis and classification
2- Statistical modelling for time-series classification
3- Model-based classification for irregularly sampled time-series
4- Joint supervised classification and reconstruction of irregularly sampled satellite image times series
5- Mixture of multivariate gaussian processes for classification of irregularly sampled SITS
Conclusion and perspectivesNuméro de notice : 15280 Affiliation des auteurs : non IGN Thématique : IMAGERIE/MATHEMATIQUE Nature : Thèse française Note de thèse : Thèse de Doctorat : Mathématiques Appliquées : Grenoble : 2021 Organisme de stage : Laboratoire Jean Kuntzmann DOI : sans En ligne : https://hal.science/tel-03682025 Format de la ressource électronique : URL Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=101161 Unmixing-based Sentinel-2 downscaling for urban land cover mapping / Fei Xu in ISPRS Journal of photogrammetry and remote sensing, vol 171 (January 2021)
[article]
Titre : Unmixing-based Sentinel-2 downscaling for urban land cover mapping Type de document : Article/Communication Auteurs : Fei Xu, Auteur ; Ben Somers, Auteur Année de publication : 2021 Article en page(s) : pp 133 - 154 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Traitement d'image optique
[Termes IGN] analyse des mélanges spectraux
[Termes IGN] bande spectrale
[Termes IGN] Berlin
[Termes IGN] Bruxelles
[Termes IGN] cartographie urbaine
[Termes IGN] Cologne
[Termes IGN] corrélation
[Termes IGN] fusion d'images
[Termes IGN] image Sentinel-MSI
[Termes IGN] matrice de co-occurrence
[Termes IGN] occupation du solRésumé : (auteur) With the launch of Sentinel-2 new opportunities for large scale urban mapping arise. However, the spectral information embedded in the Sentinel-2 20 m spatial resolution bands cannot yet be fully explored in heterogeneous urban landscapes. The 20 m image pixels are often composed of different land covers, resulting in a difficult to interpret mixed pixel spectrum. Here, we propose an unmixing-based image fusion algorithm (UnFuSen2) that self-adapts to the spectral variability of varying land covers and improves the image fusion accuracy by constraining the unmixing equations on the basis of spectral mixing models and the correlation between spectral bands of coarse and fine spatial resolution, respectively. When compared to alternative state-of-the-art downscaling methods UnFuSen2 consistently showed the highest accuracy when applied across test sites in three different European cities (RMSEUnFuSen2 = 203 vs RMSEalternatives = [252, 337]). In a next step, we applied Multiple Endmember Spectral Mixture Analysis (MESMA) on the downscaled Sentinel-2 image cube (i.e. ten 10 m bands) to generate subpixel urban land cover fractions. We compared our MESMA results against the traditional MESMA output as applied on the original Sentinel-2 image cube (i.e. four 10 m bands and six 20 m bands) and tested its robustness against reference data obtained over all three study sites. Results revealed an average decrease in RMSE of respectively 18% and 8% for impervious surface and vegetation fractions when our approach was compared to the traditional MESMA outcomes. Numéro de notice : A2021-015 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.isprsjprs.2020.11.009 Date de publication en ligne : 26/11/2020 En ligne : https://doi.org/10.1016/j.isprsjprs.2020.11.009 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=96419
in ISPRS Journal of photogrammetry and remote sensing > vol 171 (January 2021) . - pp 133 - 154[article]Exemplaires(3)
Code-barres Cote Support Localisation Section Disponibilité 081-2021011 SL Revue Centre de documentation Revues en salle Disponible 081-2021013 DEP-RECP Revue LASTIG Dépôt en unité Exclu du prêt 081-2021012 DEP-RECF Revue Nancy Dépôt en unité Exclu du prêt Urban construction waste with VHR remote sensing using multi-feature analysis and a hierarchical segmentation method / Qiang Chen in Remote sensing, vol 13 n° 1 (January-1 2021)
[article]
Titre : Urban construction waste with VHR remote sensing using multi-feature analysis and a hierarchical segmentation method Type de document : Article/Communication Auteurs : Qiang Chen, Auteur ; Qianhao Cheng, Auteur ; Jinfei Wang, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : n° 158 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection
[Termes IGN] analyse d'image orientée objet
[Termes IGN] analyse multicritère
[Termes IGN] analyse spectrale
[Termes IGN] construction
[Termes IGN] déchet
[Termes IGN] extraction de traits caractéristiques
[Termes IGN] gestion urbaine
[Termes IGN] image à très haute résolution
[Termes IGN] morphologie
[Termes IGN] Pékin (Chine)
[Termes IGN] segmentation hiérarchique
[Termes IGN] urbanisationRésumé : (auteur) With rapid urbanization, the disposal and management of urban construction waste have become the main concerns of urban management. The distribution of urban construction waste is characterized by its wide range, irregularity, and ease of confusion with the surrounding ground objects, such as bare soil, buildings, and vegetation. Therefore, it is difficult to extract and identify information related to urban construction waste by using the traditional single spectral feature analysis method due to the problem of spectral confusion between construction waste and the surrounding ground objects, especially in the context of very-high-resolution (VHR) remote sensing images. Considering the multi-feature analysis method for VHR remote sensing images, we propose an optimal method that combines morphological indexing and hierarchical segmentation to extract the information on urban construction waste in VHR images. By comparing the differences between construction waste and the surrounding ground objects in terms of the spectrum, geometry, texture, and other features, we selected an optimal feature subset to improve the separability of the construction waste and other objects; then, we established a classification model of knowledge rules to achieve the rapid and accurate extraction of construction waste information. We also chose two experimental areas of Beijing to validate our algorithm. By using construction waste separability quality evaluation indexes, the identification accuracy of construction waste in the two study areas was determined to be 96.6% and 96.2%, the separability indexes of the construction waste and buildings reached 1.000, and the separability indexes of the construction waste and vegetation reached 1.000 and 0.818. The experimental results show that our method can accurately identify the exposed construction waste and construction waste covered with a dust screen, and it can effectively solve the problem of spectral confusion between the construction waste and the bare soil, buildings, and vegetation. Numéro de notice : A2021-073 Affiliation des auteurs : non IGN Thématique : IMAGERIE/URBANISME Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.3390/rs13010158 Date de publication en ligne : 05/01/2021 En ligne : https://doi.org/10.3390/rs13010158 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=96809
in Remote sensing > vol 13 n° 1 (January-1 2021) . - n° 158[article]Using remote sensing and modeling to monitor and understand harmful algal blooms. Application to Karaoun Reservoir (Lebanon) / Najwa Sharaf (2021)PermalinkVolumes by tree species can be predicted using photogrammetric UAS data, Sentinel-2 images and prior field measurements / Mikko Kukkonen in Silva fennica, vol 55 n° 1 (January 2021)PermalinkMonitoring of wheat crops using the backscattering coefficient and the interferometric coherence derived from Sentinel-1 in semi-arid areas / Nadia Ouaadi in Remote sensing of environment, Vol 251 (15 December 2020)PermalinkAutomatic building footprint extraction from UAV images using neural networks / Zoran Kokeza in Geodetski vestnik, vol 64 n° 4 (December 2020 - February 2021)PermalinkCharacterizing the spatial and temporal variation of the land surface temperature hotspots in Wuhan from a local scale / Chen Yang in Geo-spatial Information Science, vol 23 n° 4 (December 2020)PermalinkConvolutional Neural Networks accurately predict cover fractions of plant species and communities in Unmanned Aerial Vehicle imagery / Teja Kattenborn in Remote sensing in ecology and conservation, vol 6 n° 4 (December 2020)PermalinkDeep learning for detecting and classifying ocean objects: application of YoloV3 for iceberg–ship discrimination / Frederik Hass in ISPRS International journal of geo-information, vol 9 n° 12 (December 2020)PermalinkLa difficile cartographie du territoire guyanais / Laurent Polidori in XYZ, n° 165 (décembre 2020)PermalinkExploring the inclusion of Sentinel-2 MSI texture metrics in above-ground biomass estimation in the community forest of Nepal / Santa Pandit in Geocarto international, vol 35 n° 16 ([01/12/2020])PermalinkForest cover mapping based on a combination of aerial images and Sentinel-2 satellite data compared to National Forest Inventory data / Selina Ganz in Forests, vol 11 n° 12 (December 2020)Permalink