Centre de documentation
scientifique

Recent advances in forest insect pests and diseases monitoring using UAV-based data: A systematic review / André Duarte in Forests, vol 13 n° 6 (June 2022)  

Public [article]  inForests > vol 13 n° 6 (June 2022) . - n° 911 Titre : Recent advances in forest insect pests and diseases monitoring using UAV-based data: A systematic review Type de document : Article/Communication Auteurs : André Duarte, Auteur ; Nuno Borralho, Auteur ; Pedro Cabral, Auteur ; et al., Auteur Année de publication : 2022 Article en page(s) : n° 911 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications photogrammétriques [Termes IGN] analyse d'image orientée objet [Termes IGN] apprentissage profond [Termes IGN] données lidar [Termes IGN] extraction de traits caractéristiques [Termes IGN] image captée par drone [Termes IGN] insecte nuisible [Termes IGN] maladie parasitaire [Termes IGN] modèle numérique de surface de la canopée [Termes IGN] santé des forêts [Termes IGN] structure-from-motion [Termes IGN] surveillance forestière Résumé : (auteur) Unmanned aerial vehicles (UAVs) are platforms that have been increasingly used over the last decade to collect data for forest insect pest and disease (FIPD) monitoring. These machines provide flexibility, cost efficiency, and a high temporal and spatial resolution of remotely sensed data. The purpose of this review is to summarize recent contributions and to identify knowledge gaps in UAV remote sensing for FIPD monitoring. A systematic review was performed using the preferred reporting items for systematic reviews and meta-analysis (PRISMA) protocol. We reviewed the full text of 49 studies published between 2015 and 2021. The parameters examined were the taxonomic characteristics, the type of UAV and sensor, data collection and pre-processing, processing and analytical methods, and software used. We found that the number of papers on this topic has increased in recent years, with most being studies located in China and Europe. The main FIPDs studied were pine wilt disease (PWD) and bark beetles (BB) using UAV multirotor architectures. Among the sensor types, multispectral and red–green–blue (RGB) bands were preferred for the monitoring tasks. Regarding the analytical methods, random forest (RF) and deep learning (DL) classifiers were the most frequently applied in UAV imagery processing. This paper discusses the advantages and limitations associated with the use of UAVs and the processing methods for FIPDs, and research gaps and challenges are presented. Numéro de notice : A2022-483 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article DOI : 10.3390/f13060911 Date de publication en ligne : 10/06/2022 En ligne : https://doi.org/10.3390/f13060911 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=100897 [article]

Natural disturbances risks in European boreal and temperate forests and their links to climate change : A review of modelling approaches / Joyce Machado Nunes Romeiro in Forest ecology and management, vol 509 (April-1 2022)  

Public [article]  inForest ecology and management > vol 509 (April-1 2022) . - n° 120071 Titre : Natural disturbances risks in European boreal and temperate forests and their links to climate change : A review of modelling approaches Type de document : Article/Communication Auteurs : Joyce Machado Nunes Romeiro, Auteur ; Tron Eid, Auteur ; Clara Antón-Fernández, Auteur ; et al., Auteur Année de publication : 2022 Article en page(s) : n° 120071 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] changement climatique [Termes IGN] dommage forestier causé par facteurs naturels [Termes IGN] foresterie [Termes IGN] forêt boréale [Termes IGN] forêt tempérée [Termes IGN] gelée [Termes IGN] gestion forestière adaptative [Termes IGN] incendie de forêt [Termes IGN] maladie parasitaire [Termes IGN] modèle de simulation [Termes IGN] modélisation [Termes IGN] risque naturel [Termes IGN] Scolytinae [Termes IGN] sécheresse [Vedettes matières IGN] Végétation et changement climatique Résumé : (auteur) It is expected that European Boreal and Temperate forests will be greatly affected by climate change, causing natural disturbances to increase in frequency and severity. To detangle how, through forest management, we can make forests less vulnerable to the impact of natural disturbances, we need to include the risks of such disturbances in our decision-making tools. The present review investigates: i) how the most important forestry-related natural disturbances are linked to climate change, and ii) different modelling approaches that assess the risks of natural disturbances and their applicability for large-scale forest management planning. Global warming will decrease frozen soil periods, which increases root rot, snow, ice and wind damage, cascading into an increment of bark beetle damage. Central Europe will experience a decrease in precipitation and increase in temperature, which lowers tree defenses against bark beetles and increases root rot infestations. Ice and wet snow damages are expected to increase in Northern Boreal forests, and to reduce in Temperate and Southern Boreal forests. However, lack of snow cover may increase cases of frost-damaged seedlings. The increased temperatures and drought periods, together with a fuel increment from other disturbances, likely enhance wildfire risk, especially for Temperate forests. For the review of European modelling approaches, thirty-nine disturbance models were assessed and categorized according to their required input variables and to the models’ outputs. Probability models are usually common for all disturbance model approaches, however, models that predict disturbance effects seem to be scarce. Numéro de notice : A2022-190 Affiliation des auteurs : non IGN Thématique : FORET/MATHEMATIQUE Nature : Article DOI : 10.1016/j.foreco.2022.120071 Date de publication en ligne : 10/02/2022 En ligne : https://doi.org/10.1016/j.foreco.2022.120071 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=99946 [article]

Télédétection et modélisation spatiale / Annelise Tran (2022)  

Public Titre : Télédétection et modélisation spatiale : Applications à la surveillance et au contrôle des maladies liées aux moustiques Type de document : Monographie Auteurs : Annelise Tran, Éditeur scientifique ; Eric Daudé, Éditeur scientifique ; Thibault Catry, Éditeur scientifique Editeur : Versailles : Quae Année de publication : 2022 Importance : 148 p. Format : 17 x 25 cm ISBN/ISSN/EAN : 978-2-7592-3629-9 Note générale : Bibliographie Langues : Français (fre) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes IGN] analyse multicritère [Termes IGN] cartographie des risques [Termes IGN] distribution spatiale [Termes IGN] image Landsat-8 [Termes IGN] image Landsat-ETM+ [Termes IGN] image multibande [Termes IGN] image Terra-MODIS [Termes IGN] maladie parasitaire [Termes IGN] maladie tropicale [Termes IGN] modélisation spatiale [Termes IGN] Normalized Difference Water Index [Termes IGN] surveillance sanitaire [Termes IGN] température de l'air [Termes IGN] TRMM Résumé : (éditeur) Mosquitoes are vectors of many disease-causing agents, such as malaria, dengue, chikungunya and yellow fever. According to the World Health Organisation, they cause several hundred thousand deaths each year. They are also the cause of zoonoses, such as Rift Valley fever and West Nile fever. In this context, there is a great need for operational tools to guide surveillance and control actions, both in the South - tropical and subtropical areas are the most affected by mosquito-borne diseases - and in the North, where the establishment of new species such as the tiger mosquito increases the risk of disease emergence. Earth observation imagery is of great interest to meet these needs: the spatial distribution and temporal dynamics of mosquitoes are influenced by climatic (temperature, precipitation, humidity) and environmental (availability of water areas, vegetation) variables, indicators of which can be derived from satellite imagery. Many recent studies have developed innovative methods combining remote sensing and spatial modelling to predict the spatial and temporal dynamics of mosquito vectors and associated diseases. Beyond the feasibility study, some of these methods have led to tools and processing chains that are now operational and used by public health actors and vector control operators. This book, intended for students and researchers as well as public health actors, presents a summary of this research work and these tools. Note de contenu : Introduction générale Partie I- Informations spatiales pour la surveillance des moustiques vecteurs et des maladies associées 1- Liens entre moustiques vecteurs et environnement : apport des méthodes de télédétection satellite 2- Indices spectraux et classifications d’images multispectrales pour la cartographie du risque vectoriel 3- Estimation des températures de l’air à partir d’images satellite et de stations météorologiques 4- Du recensement au bâtiment : génération de populations synthétiques 5- Texture des images satellite et caractérisation des milieux urbains favorables aux moustiques vecteurs Partie II- Analyser et prédire l’effet de variables environnementales sur la distribution et la dynamique des moustiques vecteurs 6- Modèles basés sur les données : cartographier la distribution spatiale des vecteurs 7- Modèles fondés sur les connaissances : exemple d’un outil d’évaluation multicritère pour la santé publique 8- Arbocarto : un modèle mécaniste fondé sur le cycle de vie des moustiques Aedes 9- Simulation spatiale du risque de propagation de la dengue à partir de modèles comportementaux vecteurs et hôtes Conclusion générale et perspectives Numéro de notice : 24096 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Recueil / ouvrage collectif DOI : 10.35690/978-2-7592-3629-9 En ligne : https://doi.org/10.35690/978-2-7592-3629-9 Format de la ressource électronique : URL Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=102570

Early detection of forest stress from European spruce bark beetle attack, and a new vegetation index: Normalized distance red & SWIR (NDRS) / Langning Huo in Remote sensing of environment, Vol 255 (March 2021)  

Public [article]  inRemote sensing of environment > Vol 255 (March 2021) . - n° 112240 Titre : Early detection of forest stress from European spruce bark beetle attack, and a new vegetation index: Normalized distance red & SWIR (NDRS) Type de document : Article/Communication Auteurs : Langning Huo, Auteur ; Henrik J. Persson, Auteur ; Eva Lindberg, Auteur Année de publication : 2021 Article en page(s) : n° 112240 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes IGN] bande infrarouge [Termes IGN] écho radar [Termes IGN] houppier [Termes IGN] image Sentinel-MSI [Termes IGN] image Sentinel-SAR [Termes IGN] indice de stress [Termes IGN] indice de végétation [Termes IGN] insecte nuisible [Termes IGN] maladie parasitaire [Termes IGN] Picea mariana [Termes IGN] Scolytinae [Termes IGN] signature spectrale [Termes IGN] Suède [Termes IGN] vulnérabilité Résumé : (auteur) The European spruce bark beetle (Ips typographus [L.]) is one of the most damaging pest insects of European spruce forests. A crucial measure in pest control is the removal of infested trees before the beetles leave the bark, which generally happens before the end of June. However, stressed tree crowns do not show any significant color changes in the visible spectrum at this early-stage of infestation, making early detection difficult. In order to detect the related forest stress at an early stage, we investigated the differences in radar and spectral signals of healthy and stressed trees. How the characteristics of stressed trees changed over time was analyzed for the whole vegetation season, which covered the period before attacks (April), early-stage infestation (‘green-attacks’, May to July), and middle to late-stage infestation (August to October). The results show that spectral differences already existed at the beginning of the vegetation season, before the attacks. The spectral separability between the healthy and infested samples did not change significantly during the ‘green-attack’ stage. The results indicate that the trees were stressed before the attacks and had spectral signatures that differed from healthy ones. These stress-induced spectral changes could be more efficient indicators of early infestations than the ‘green-attack’ symptoms. In this study we used Sentinel-1 and 2 images of a test site in southern Sweden from April to October in 2018 and 2019. The red and SWIR bands from Sentinel-2 showed the highest separability of healthy and stressed samples. The backscatter from Sentinel-1 and additional bands from Sentinel-2 contributed only slightly in the Random Forest classification models. We therefore propose the Normalized Distance Red & SWIR (NDRS) index as a new index based on our observations and the linear relationship between the red and SWIR bands. This index identified stressed forest with accuracies from 0.80 to 0.88 before the attacks, from 0.80 to 0.82 in the early-stage infestation, and from 0.81 to 0.91 in middle- and late-stage infestations. These accuracies are higher than those attained by established vegetation indices aimed at ‘green-attack’ detection, such as the Normalized Difference Water Index, Ratio Drought Index, and Disease Stress Water Index. By using the proposed method, we highlight the potential of using NDRS with Sentinel-2 images to estimate forest vulnerability to European spruce bark beetle attacks early in the vegetation season. Numéro de notice : A2021-190 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article DOI : 10.1016/j.rse.2020.112240 Date de publication en ligne : 20/01/2021 En ligne : https://doi.org/10.1016/j.rse.2020.112240 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=97111 [article]

Evaluating the impact of declining tsetse fly (Glossina pallidipes) habitat in the Zambezi valley of Zimbabwe / Farai Matawa in Geocarto international, vol 35 n° 12 ([01/09/2020])  

Public [article]  inGeocarto international > vol 35 n° 12 [01/09/2020] . - pp 1373 - 1384 Titre : Evaluating the impact of declining tsetse fly (Glossina pallidipes) habitat in the Zambezi valley of Zimbabwe Type de document : Article/Communication Auteurs : Farai Matawa, Auteur ; Amon Murwira, Auteur ; Peter M. Atkinson, Auteur Année de publication : 2020 Article en page(s) : pp 1373 - 1384 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Analyse spatiale [Termes IGN] biodiversité [Termes IGN] bovin [Termes IGN] couvert végétal [Termes IGN] diptère [Termes IGN] distance [Termes IGN] distribution spatiale [Termes IGN] forêt tropicale [Termes IGN] habitat d'espèce [Termes IGN] maladie parasitaire [Termes IGN] Zambèze (fleuve) [Termes IGN] Zimbabwe Résumé : (auteur) Tsetse flies transmit trypanosomes that cause Human African Trypanosomiasis (HAT) in humans and African Animal Trypanosomiasis (AAT) in animals. Understanding historical trends in the spatial distribution of tsetse fly habitat is necessary for planning vector control measures. The objectives of this study were (i) to test for evidence of any trends in suitable tsetse fly habitat and (ii) to test whether there is an association between trypanosomiasis detected from livestock sampled in dip tanks and local tsetse habitat in the project area. Results indicate a significant decreasing trend in the amount of suitable habitat. There is no significant correlation between trypanosomiasis prevalence rates in cattle and distance from patches of suitable tsetse habitat. The observed low trypanosomiasis prevalence and the lack of dependence on suitable tsetse fly habitat can be explained by the observed decreases in suitable tsetse habitat, which themselves are due to expansion of settlement and agriculture in North Western Zimbabwe. Numéro de notice : A2020-486 Affiliation des auteurs : non IGN Thématique : GEOMATIQUE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1080/10106049.2019.1576780 Date de publication en ligne : 21/03/2019 En ligne : https://doi.org/10.1080/10106049.2019.1576780 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=95653 [article]

Assessment of malaria hazard, vulnerability, and risks in Dire Dawa City Administration of eastern Ethiopia using GIS and remote sensing / Abdinasir Moha in Applied geomatics, vol 12 n° 1 (April 2020)  

Permalink

Adapting an existing semi-automatized image processing chain to enable Sentinel-2 data classification. / Hiyam Elbadri (2018) 

Permalink

Automatisation de l’acquisition et du traitement des images Sentinel-2 pour le calcul d’indices de végétation aidant à la prévention des pics de paludisme à Madagascar / Charlotte Wolff (2017)

Permalink

Scabies among the French armed forces in 2015 / Constance Brossier in Journal of infection, vol 73 n° 3 (September 2016)  

Permalink

Ash to ashes? / David Roderick in GEO: Geoconnexion international, vol 15 n° 5 (May 2016)

Permalink

The pine shoot beetle Tomicus piniperda as a plausible vector of Fusarium circinatum in northern Spain / Diana Bezos in Annals of Forest Science, vol 72 n° 8 (December 2015)  

Permalink

Oak powdery mildew changes growth patterns in its host tree: host tolerance response and potential manipulation of host physiology by the parasite / Marie-Laure Desprez-Loustau in Annals of Forest Science, vol 71 n° 5 (July - August 2014)  

Permalink

Dracunculiasis, proximity, and risk: Analyzing the location of Guinea worm disease in a GIS / Nataniel Royal in Transactions in GIS, vol 17 n° 2 (April 2013)  

Permalink

Mapping malaria severity zones with Nigeriasat-1 incorporated into geographical information system / E. Ogunbadewa in Geocarto international, vol 27 n° 7 (November 2012)  

Permalink

A longitudinal study of malaria associated with deforestation in Sonitpur district of Assam, India / M. Nath in Geocarto international, vol 27 n° 1 (February 2012)  

Permalink