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Effect of riparian soil moisture on bacterial, fungal and plant communities and microbial decomposition rates in boreal stream-side forests / M.J. Annala in Forest ecology and management, vol 519 (September-1 2022)  

Public [article]  inForest ecology and management > vol 519 (September-1 2022) . - n° 120344 Titre : Effect of riparian soil moisture on bacterial, fungal and plant communities and microbial decomposition rates in boreal stream-side forests Type de document : Article/Communication Auteurs : M.J. Annala, Auteur ; K. Lehosmaa, Auteur ; S.H.K. Ahonen, Auteur ; et al., Auteur Année de publication : 2022 Article en page(s) : n° 120344 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] cours d'eau [Termes IGN] écosystème forestier [Termes IGN] Finlande [Termes IGN] forêt boréale [Termes IGN] forêt ripicole [Termes IGN] Fungi [Termes IGN] humidité du sol [Termes IGN] micro-organisme [Termes IGN] plante ripicole [Termes IGN] taxinomie [Termes IGN] zone tampon [Vedettes matières IGN] Ecologie forestière Résumé : (auteur) Riparian habitats of boreal forests are considered as hotspots for biochemical processes and biodiversity, and varying width riparian buffers have been proposed to protect species diversity of the riparian forests. However, evidence of the role of soil moisture variation in shaping riparian biodiversity and ecosystem functioning remain scarce particularly regarding belowground diversity. We studied how distance from the stream and soil moisture of the riparian zone affected species richness and community composition of plants, bacteria, and fungi as well as microbial decomposition rates. Using a split-plot design with a plant survey and amplicon sequencing for microorganisms we identified taxa associated with different categories of moisture and distance from the stream along six headwater stream-sides in middle boreal forests in Northern Finland. Tea-bag Index was used to assess the decomposition rates. PERMANOVA and linear mixed-effect models were used to analyze the data. Variation in riparian soil moisture influenced species composition and richness of plants and bacteria. Plant communities also changed from herbaceous dominated to shrub dominated with increasing distance from the stream. Fungal communities, however, did not respond to soil moisture or distance from the stream, and there were only slight differences in fungal trophic guilds among moisture and distance categories. Decomposition of organic material by microorganisms was faster adjacent to the stream than further away, and moist riparian areas had higher decomposition rates than drier ones. Decomposition rates were positively related to pH, Ca, Mg and NH4 and soil temperature. Synthesis and applications We show that above- and belowground diversity and microbial decomposition are associated to soil moisture at riparian sites supporting the idea of leaving wider unmanaged buffers in moist habitats to safeguard the overall forest diversity. Our findings further emphasize the need to consider soil moisture when planning the measures for riparian protection as changes in riparian soil moisture could lead to deterioration of organic matter decomposition. Different responses of the examined plant and microbial communities to riparian soil conditions clearly imply that overall riparian diversity cannot be explained based on a single community type, and that different organisms may respond differently to human-induced changes in stream riparian zone. Numéro de notice : A2022-485 Affiliation des auteurs : non IGN Thématique : BIODIVERSITE/FORET Nature : Article DOI : 10.1016/j.foreco.2022.120344 Date de publication en ligne : 04/06/2022 En ligne : https://doi.org/10.1016/j.foreco.2022.120344 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=100923 [article]

Tree mortality caused by Diplodia shoot blight on Pinus sylvestris and other mediterranean pines / Maria Caballol in Forest ecology and management, vol 505 (February-1 2022)  

Public [article]  inForest ecology and management > vol 505 (February-1 2022) . - n° 119935 Titre : Tree mortality caused by Diplodia shoot blight on Pinus sylvestris and other mediterranean pines Type de document : Article/Communication Auteurs : Maria Caballol, Auteur ; Maia Ridley, Auteur ; Michele Colangelo, Auteur ; et al., Auteur Année de publication : 2022 Article en page(s) : n° 119935 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] dendrochronologie [Termes IGN] dépérissement [Termes IGN] endophyte [Termes IGN] épidémie [Termes IGN] Espagne [Termes IGN] grêle [Termes IGN] houppier [Termes IGN] maladie cryptogamique [Termes IGN] mortalité [Termes IGN] Pinus halepensis [Termes IGN] Pinus nigra [Termes IGN] Pinus pinea [Termes IGN] Pinus sylvestris [Termes IGN] santé des forêts [Termes IGN] sécheresse [Vedettes matières IGN] Végétation et changement climatique Résumé : (auteur) Diplodia shoot blight is an emergent forest disease in Europe caused by Diplodia sapinea. The short-term impacts of the pathogen on tree physiology are well known, but its capacity to cause mortality has been poorly documented. We compared the survival of four pine species affected by Diplodia shoot blight following a hailstorm: Pinus sylvestris, P. nigra, P. pinea and P. halepensis. In the case of P. sylvestris, survival in the hail-affected sites was compared with survival in other sites affected by Diplodia shoot blight with no hailstorm records. Mortality and crown condition were recorded over two years. Dendrochronological analyses were conducted to assess growth responses to drought and to test the influence of radial growth before the outbreak of Diplodia shoot blight on survival. The endophytic community, as well as the abundance of D. sapinea, was quantified by metabarcoding and qPCR respectively, and were correlated with crown damage. Crown damage was the best predictor of mortality across species. Pinus sylvestris experienced a much higher rate of mortality than P. nigra, P. pinea and P. halepensis. Two years after the outbreak, P. halepensis was the only species that could recover crown condition. Mortality was found to be unrelated to radial growth prior the outbreak. Drought responses did not correlate with mortality differences across pine species or sites. In the case of P. sylvestris, mortality was initially higher amongst diseased trees in areas affected by hailstorms than in sites not affected by hailstorms, however it tended to equalise after two years. Amongst P. sylvestris trees, crown damage correlated with a higher abundance of the pathogen. Signs of competition amongst endophytes were observed between non-defoliated and defoliated Scots pine trees following hailstorms. Our study shows that D. sapinea can cause a significant mortality to P. sylvestris. The legacy effects of crown damage can last for at least two years after an outbreak. During this time, crown damage is a good predictor of survival, and can help managers decide which trees remove after an outbreak. Numéro de notice : A2022-042 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article DOI : 10.1016/j.foreco.2021.119935 Date de publication en ligne : 23/12/2021 En ligne : https://doi.org/10.1016/j.foreco.2021.119935 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=99400 [article]

Drought in the forest breaks plant–fungi interactions / Andrzej Boczoń in European Journal of Forest Research, vol 140 n° 6 (December 2021)  

Public [article]  inEuropean Journal of Forest Research > vol 140 n° 6 (December 2021) . - pp 1301 - 1321 Titre : Drought in the forest breaks plant–fungi interactions Type de document : Article/Communication Auteurs : Andrzej Boczoń, Auteur ; Dorota Hilszczańska, Auteur ; Marta Wrzosek, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : pp 1301 - 1321 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] champignon mycorhizien [Termes IGN] dépérissement [Termes IGN] écosystème forestier [Termes IGN] endophyte [Termes IGN] Europe centrale [Termes IGN] relations plante - sol [Termes IGN] sécheresse [Termes IGN] stress hydrique [Termes IGN] teneur en eau de la végétation [Vedettes matières IGN] Végétation et changement climatique Résumé : (auteur) Drought in the forest is not only a prolonged state of water shortage, but also an occasion where interactions between plants and fungi are affected. Water efficiency accelerates a range of pathologies in interactions between organisms, influencing the ecosystems and their interacting biological components. This study focuses on the role of mycorrhizal and endophyte fungi in alleviating the effects of soil water shortage, and on the impact of their altered activity during drought on the health of trees. The issues presented here show the fundamental role of the mycorrhizal mycelium and the mechanism of water transport to the plant in the course of other phenomena (withering, pathogenesis, endophytes biology) that occur in trees under influence of drought, with particular attention on managed coniferous stands. Conclusions resulting from published information on this topic emphasize the negative impact of soil moisture deficiency on the ectomycorrhizal fungi functioning and, in contrast, on the promotion of the growth of some endophytes, pathogens and hemi-parasitic mistletoes (Viscum spp.). Numéro de notice : A2021-836 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article DOI : 10.1007/s10342-021-01409-5 Date de publication en ligne : 04/09/2021 En ligne : https://doi.org/10.1007/s10342-021-01409-5 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=99016 [article]

Towards linking aboveground vegetation properties and soil microbial communities using remote sensing / Yuki Hamada in Photogrammetric Engineering & Remote Sensing, PERS, vol 80 n° 4 (April 2014)  

Public [article]  inPhotogrammetric Engineering & Remote Sensing, PERS > vol 80 n° 4 (April 2014) . - pp 311 - 321 Titre : Towards linking aboveground vegetation properties and soil microbial communities using remote sensing Type de document : Article/Communication Auteurs : Yuki Hamada, Auteur ; Jack A. Gilbert, Auteur ; Peter Larsen, Auteur ; Madeline J. Nogaard, Auteur Année de publication : 2014 Article en page(s) : pp 311 - 321 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes IGN] analyse diachronique [Termes IGN] biogéographie [Termes IGN] biologie [Termes IGN] biotope [Termes IGN] écosystème [Termes IGN] micro-organisme [Termes IGN] qualité du sol [Termes IGN] sous-sol [Termes IGN] surface du sol [Termes IGN] télédétection spatiale Résumé : (Auteur) Despite their vital role in terrestrial ecosystem function, the distributions and dynamics of soil microbial communities (SMCs) are poorly understood. Vegetation and soil properties are the primary factors that influence SMCs. This paper discusses the potential effectiveness of remote sensing science and technologies for mapping SMC biogeography by characterizing surface biophysical properties (e.g., plant traits and community composition) strongly correlated with SMCs. Using remotely sensed biophysical properties to predict SMC distributions is extremely challenging because of the intricate interactions between biotic and abiotic factors and between above- and below-ground ecosystems. However, the integration of biophysical and soil remote sensing with geospatial information about the environment holds great promise for mapping SMC biogeography. Additional research needs involve microbial taxonomic definition, soil environmental complexity, and scaling strategies. The collaborative effort of experts from diverse disciplines is essential to linking terrestrial surface biosphere observations with subsurface microbial community distributions using remote sensing. Numéro de notice : A2014-209 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Article DOI : 10.14358/PERS.80.4.311 En ligne : https://doi.org/10.14358/PERS.80.4.311 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=33112 [article]

The application of ASTER imageries and mathematical evaluation method in detecting cyanobacteria in biological soil crust, Chadormalu area, Central Iran / A. Moghtaderi in Photo interprétation, European journal of applied remote sensing, vol 47 n° 2 - 3 (juin 2011)

Public [article]  inPhoto interprétation, European journal of applied remote sensing > vol 47 n° 2 - 3 (juin 2011) . - pp 41 - 55 Titre : The application of ASTER imageries and mathematical evaluation method in detecting cyanobacteria in biological soil crust, Chadormalu area, Central Iran Titre original : Détection de croûtes biologiques à l'aide de l'imagerie ASTER. Exemple de la zone de Chadormalu, Iran central Type de document : Article/Communication Auteurs : A. Moghtaderi, Auteur ; F. Moore, Auteur ; M. Taghavi, Auteur ; R. Rezaei, Auteur Année de publication : 2011 Article en page(s) : pp 41 - 55 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes IGN] croute terrestre [Termes IGN] désert [Termes IGN] image multibande [Termes IGN] image Terra-ASTER [Termes IGN] Iran [Termes IGN] micro-organisme [Termes IGN] réflectance du sol Résumé : (Auteur) Soil surfaces in arid and semi-arid lands often lack photoautotrophic life but are covered by communities of soil surface covering organisms able to tolerate dehydration and thus adapted to aridity. One of the important objectives of multi-spectral remote sensing instruments is the detection of the optical characteristics of the Earth's surface using high spectral resolution bands. In this study ASTER imagery and reflected radiation in VNIR bands were used to investigate Biological Soil Crusts (BSCs) in the field. By applying IARR (Internal Average Relative Reflectance), FCC (False Color Composite), MNF (Minimum Noise Fraction Transform), MEM (Mathematical Evaluation Method) techniques, BSCs are successfully detected in the Chadormalu desert area of central Iran.This study clearly shows the capability of ASTER data (VNIR bands) to detect BSC or cyanobacteria soil crusts. The MEM method is suggested as an accurate tool for full scale studies. Numéro de notice : A2011-533 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Article DOI : sans Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=73757 [article]

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