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AngiospermeSynonyme(s)plante à fleurs magnoliophyteVoir aussi |
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Titre : Genome-wide evolutionary response of European oaks since the Little Ice Age Type de document : Article/Communication Auteurs : Dounia Saleh, Auteur ; Jun Chen, Auteur ; Jean-Charles Leple, Auteur ; Thibault Leroy, Auteur ; Laura Truffaut, Auteur ; Benjamin Dencausse, Auteur ; et al., Auteur ; François Morneau , Auteur Editeur : Paris [France] : Institut national de recherche pour l’agriculture, l’alimentation et l’environnement INRAE (2020-) Année de publication : 2021 Projets : 3-projet - voir note / Importance : 35 p. Note générale : bibliographie
This research was supported by the European Research Council through an Advanced Grant (project TREEPEACE # FP7-339728), by France Génomique (project EVOL-OAK, ANR-10-INBS-09–08), and by the French Forest Service (ONF) (INRAE-ONF TREEPEACE contract).Langues : Anglais (eng) Descripteur : [Termes IGN] dix-huitième siècle
[Termes IGN] dix-neuvième siècle
[Termes IGN] dix-septième siècle
[Termes IGN] France (géographie physique)
[Termes IGN] génétique forestière
[Termes IGN] Quercus sessiliflora
[Termes IGN] quinzième siècle
[Termes IGN] seizième siècle
[Vedettes matières IGN] BotaniqueRésumé : (auteur) The pace of tree microevolution during Anthropocene warming is largely unknown. We used a retrospective approach to monitor genomic changes in oak trees since the Little Ice Age (LIA). Allelic frequency changes were assessed from whole-genome pooled sequences for four age-structured cohorts of sessile oak (Quercus petraea) dating back to 1680, in each of three different oak forests in France. The genetic covariances of allelic frequency changes increased between successive time periods, highlighting genome-wide effects of linked selection. We found imprints of convergent linked selection in the three forests during the late LIA, and a shift of selection during more recent time periods. The changes in allelic covariances within and between forests mirrored the documented changes in the occurrence of extreme events (droughts and frosts) over the last three hundred years. The genomic regions with the highest covariances were enriched in genes involved in plant responses to pathogens and abiotic stresses (temperature and drought). These responses are consistent with the reported sequence of frost (or drought) and disease damage ultimately leading to the oak dieback after extreme events. Our results therefore provide evidence of selection operating on long-lived species during recent climatic changes. Numéro de notice : P2021-004 Affiliation des auteurs : IGN+Ext (2020- ) Thématique : FORET Nature : Preprint nature-HAL : Préprint DOI : 10.1101/2021.05.25.445558 Date de publication en ligne : 27/05/2021 En ligne : https://doi.org/10.1101/2021.05.25.445558 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=97846 Interactions between oak and cervids during the process of forest regeneration / Julien Barrere (2021)
Titre : Interactions between oak and cervids during the process of forest regeneration : the case study of plain temperate oak stands (Quercus robur et Q. petraea) Type de document : Thèse/HDR Auteurs : Julien Barrere, Auteur ; Sonia Saïd, Directeur de thèse ; Catherine Collet, Directeur de thèse Editeur : Nancy, Metz : Université de Lorraine Année de publication : 2021 Importance : 315 p. Format : 21 x 30 cm Note générale : Bibliographie
Thèse pour obtenir le grade de Docteur de L'Université d'Orléans, Spécialité Biologie et écologie des forêts et des agrosystèmesLangues : Anglais (eng) Descripteur : [Termes IGN] analyse spatio-temporelle
[Termes IGN] canopée
[Termes IGN] Cervidae
[Termes IGN] données spatiotemporelles
[Termes IGN] écosystème forestier
[Termes IGN] faune locale
[Termes IGN] forêt tempérée
[Termes IGN] inventaire forestier local
[Termes IGN] migration animale
[Termes IGN] peuplement forestier
[Termes IGN] Quercus pedunculata
[Termes IGN] Quercus sessiliflora
[Termes IGN] régénération (sylviculture)
[Termes IGN] Suède
[Termes IGN] Vosges, massif des
[Vedettes matières IGN] ForesterieIndex. décimale : THESE Thèses et HDR Résumé : (Auteur) Les cervidés ont vu leur abondance et leur distribution spatiale augmenter fortement depuis les dernières décennies, en France, et plus généralement à l’échelle de l’hémisphère Nord. Si ces espèces jouent un rôle clé dans le fonctionnement des écosystèmes forestiers, le niveau actuel des populations compromet le processus de régénération forestière de certaines essences cruciales pour la filière sylvicole telles que les chênes sessile et pédonculé (Quercus robur et Q. petraea). L’objectif de cette thèse est de quantifier et décrire les mécanismes sous-jacent de la contrainte exercée par les cervidés sur la régénération et d’identifier dans quelle mesure certaines opérations sylvicoles (coupe, dégagement et pose d’enclos) influencent cette contrainte. L’analyse de la composition de panses de cerf et de chevreuil sur le site de La Petite Pierre (Vosges) a permis de montrer que les glands de chêne représentaient une ressource significative dans le régime alimentaire de ces deux espèces, mais que leur consommation de gland saturait les années de forte fructification. Par des approches expérimentales, nous avons mis en évidence que l’abroutissement de la pousse apicale réduisait toujours la croissance en hauteur des semis que ce soit en condition de terrain, ou en pépinière, et que ce phénomène s’expliquait par une faible plasticité d’allocation des ressources pour compenser la perte de tissu. L’analyse d’un résultat d’un réseau d’enclos-exclos répartis sur plusieurs sites en France et en Suède a permis de montrer que la coupe d’arbre adulte pour augmenter l’ouverture de la canopée accentuait l’effet négatif des cervidés sur la croissance et la survie de jeunes semis de chêne, via une plus forte fréquentation des cervidés dans les patches de régénération ouverts. Enfin, suite à l’implémentant du processus d’herbivorie dans un modèle de dynamique forestière (bibliothèque Régénération de CAPSIS), j’ai effectué des simulations suggérant que sous une forte pression d’herbivorie, des opérations de dégagement moins fréquentes et maintenant des espèces accompagnatrices appétentes comme le charme permettrait de réduire l’influence négative des cervidés sur la croissance du chêne. En conclusion, les résultats de cette thèse étayent l’hypothèse que les cervidés représentent une contrainte significative pour le processus de régénération du chêne, mais suggère qu’une gestion de la végétation de sous-bois adaptée permettrait de réduire cette contrainte et de se rapprocher d’un équilibre plus durable entre faune sauvage et activités sylvicoles. Note de contenu :
CHAPTER 1 - Introduction
1.1 The anthropic origin of an imbalance between forest trees and wildlife
1.2 Managing the balance between forests and large herbivores
1.3 Presentation of the studied species and their specificity
1.4 On the drivers and constraints of oak regeneration
1.5 Interactions between oak and cervids throughout the regeneration process, and remaining knowledge gaps
1.6 Objective of the thesis and structure of the manuscript
CHAPTER 2 - Scientific Approaches
2.1 Observational data for the study of spatial and temporal patterns
2.2 Experimental approaches to studying forest-deer interactions
2.3 An in silico approach to synthesize multiple data sources
2.4 Conclusion
CHAPTER 3 - How does oak mast seeding affect the feeding behaviour of sympatric red and roe deer ?
3.1 Abstract
3.2 Introduction
3.3 Materials and methods
3.4 Results
3.5 Discussion
3.6 Conclusion
3.7 Acknowledgments
3.8 Appendices
CHAPTER 4 - Do trait responses to simulated browsing in Quercus robur saplings affect their attractiveness to Capreolus capreolus the following year?
4.1 Abstract
4.2 Introduction
4.3 Material and methods
4.4 Results
4.5 Discussion
4.6 Conclusions
4.7 Funding
4.8 Authorship
4.9 Acknowledgments
4.10 Appendices
CHAPTER 5 - Oak responses to browsing in field conditions
5.1 Context and objective
5.2 Overview of the methodology
5.3 Results
5.4 Conclusion
CHAPTER 6 - Canopy openness and exclusion of wild ungulates act synergistically to improve oak natural regeneration
6.1 Abstract
6.2 Introduction
6.3 Material and methods
6.4 Results
6.5 Discussion
6.6 Conclusion
6.7 Acknowledgments
6.8 Appendices
CHAPTER 7 - The influence of deer browsing on oak regeneration is conditioned by the shrub layer - insights from a modeling approach
7.1 Preamble
7.2 Introduction
7.3 Including deer browsing in the CAPSIS regeneration library
7.4 A first set of simulations
7.5 Perspectives and conclusion
CHAPTER 8 - Discussion and perspectives
8.1 Overview of the results
8.2 Perspectives
8.3 General conclusion
CHAPTER 9 - Résumé de la thèse en Français
9.1 Introduction
9.2 Influence du masting du chêne sur le comportement alimentaire du cerf et du chevreuil
9.3 Réponse des jeunes chênes à l’abroutissement, et conséquence pour l’attractivité du plant
9.4 Influence croisée de l’ouverture de la canopée et de l’exclusion des ongulés sauvages sur la régénération du chêne
9.5 L’influence de l’abroutissement sur la régénération du chêne est conditionné par la végétation accompagnatrice
9.6 Synthèse et perspectivesNuméro de notice : 26952 Affiliation des auteurs : non IGN Thématique : BIODIVERSITE/FORET Nature : Thèse française Note de thèse : Thèse de Doctorat : Biologie et écologie des forêts et des agrosystèmes : Lorraine : 2021 Organisme de stage : Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement INRAE DOI : sans Date de publication en ligne : 11/01/2023 En ligne : https://hal.univ-lorraine.fr/tel-03702537v1/document Format de la ressource électronique : URL Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=102436 Is Xylella fastidiosa a serious threat to European forests? / Marie-Laure Desprez-Loustau in Forestry, an international journal of forest research, vol 94 n° 1 (January 2021)
[article]
Titre : Is Xylella fastidiosa a serious threat to European forests? Type de document : Article/Communication Auteurs : Marie-Laure Desprez-Loustau, Auteur ; Yialmaz Balci, Auteur ; Daniele Cornara, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : pp 1 - 17 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] Acer pseudoplatanus
[Termes IGN] Amérique du nord
[Termes IGN] dépérissement
[Termes IGN] écosystème forestier
[Termes IGN] Europe (géographie politique)
[Termes IGN] Italie
[Termes IGN] maladie bactérienne
[Termes IGN] Olea europaea
[Termes IGN] Quercus (genre)
[Termes IGN] Ulmus (genre)
[Termes IGN] viticulture
[Vedettes matières IGN] Végétation et changement climatiqueRésumé : (auteur) The recent emergence of Olive Quick Decline Syndrome in Italy, caused by Xylella fastidiosa, has drawn attention to the risks posed by this vector-borne bacterium to important crops in Europe (especially fruit trees and grapevine). Comparatively very little is known on actual and potential impacts of this pathogen in forests, in the native (North American) and introduced (European) regions, respectively. The present review aims to address important questions related to the threat posed by X. fastidiosa to European forests, such as the following: What are the symptoms, hosts and impact of bacterial leaf scorch caused by X. fastidiosa on trees in North America? Which forest tree species have been found infected in the introduction area in Europe? How does X. fastidiosa cause disease in susceptible hosts? Are there any X. fastidiosa genotypes (subspecies and sequence types) specifically associated with forest trees? How is X. fastidiosa transmitted? What are the known and potential vectors for forest trees? How does vector ecology affect disease? Is the distribution of X. fastidiosa, especially the strains associated with trees, restricted by climatic factors? Is disease risk for trees different in forest ecosystems as compared with urban settings? We conclude by pointing to important knowledge gaps related to all these questions and strongly advocate for more research about the Xylella-forest pathosystems, in both North America and Europe. Numéro de notice : A2021-072 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1093/forestry/cpaa029 Date de publication en ligne : 06/08/2020 En ligne : https://doi.org/10.1093/forestry/cpaa029 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=96805
in Forestry, an international journal of forest research > vol 94 n° 1 (January 2021) . - pp 1 - 17[article]Range-wide demographic patterns in European forests along climatic marginality gradients : An approach using national forest inventories / Alexandre Changenet (2021)
Titre : Range-wide demographic patterns in European forests along climatic marginality gradients : An approach using national forest inventories Type de document : Thèse/HDR Auteurs : Alexandre Changenet, Auteur ; Marta Benito-Garzon, Directeur de thèse ; Annabel J. Porté, Directeur de thèse Editeur : Bordeaux : Université de Bordeaux Année de publication : 2021 Importance : 305 p. Format : 21 x 30 cm Note générale : bibliographie
Thèse présentée pour obtenir le grade de Docteur de l'Université de Bordeaux, Ecologie évolutive, fonctionnelle et des communautésLangues : Anglais (eng) Descripteur : [Termes IGN] Allemagne
[Termes IGN] changement climatique
[Termes IGN] écologie forestière
[Termes IGN] écosystème forestier
[Termes IGN] Espagne
[Termes IGN] espèce exotique envahissante
[Termes IGN] Finlande
[Termes IGN] gradient de marginalité climatique
[Termes IGN] inventaire forestier étranger (données)
[Termes IGN] inventaire forestier national (données France)
[Termes IGN] mortalité
[Termes IGN] Quercus rubra
[Termes IGN] répartition géographique
[Termes IGN] Robinia pseudoacacia
[Termes IGN] sécheresse
[Termes IGN] Suède
[Termes IGN] Wallonie (Belgique)
[Vedettes matières IGN] Inventaire forestierIndex. décimale : THESE Thèses et HDR Résumé : (auteur) Modern climate change is reshaping species distributions, particularly on slow shifting organisms such as trees. Forests composition is therefore expected to change in the coming decades, which will alter ecosystem functions and biodiversity, with negative ecological and societal consequences for the planet.Tree distribution depends on several demographic traits such as recruitment, growth and mortality that interact across large climatic gradients. Yet, mortality is rising in all forested biomes in the world. In Europe for instance, forest mortality increases towards the climatic trailing edge of the species ranges as a response to drought. These high mortality rates are usually related to a lack of recruitment, which may induce vegetation shifts, but also opening new opportunities for the establishment of exotic invasive species. As demographic trait responses to climate vary across and within species, understanding trait interactions along large climatic gradients is crucial to better predict the impact of climate change on forest productivity, composition and range-shift dynamics.In this work I analyzed tree mortality and recruitment patterns of twenty of the most common native species and two exotic species in European forests and their triggered drivers. To this aim, I used data of 2 million trees from 153 892 plots measured in the National Forest Inventories from France, Spain, Germany, Belgium (Wallonia), Sweden and Finland.In the first chapter, I analyzed tree mortality and showed that the highest mortality occurrence happens in the climatic trailing edge, driven by drought, whereas the intensity of mortality is triggered by competition, drought and high temperatures and was uniformly scattered across species ranges. In addition, the occurrence of mortality was the highest in the trailing edge of temperate species and the lowest in the leading edge for half of the Mediterranean species.In the second chapter I analyzed tree recruitment, showing that for most species, there are no differences in recruitment across species ranges. Recruitment was strongly limited by competition and often depended on age, or growth rate of the plot. Surprisingly, the role of drought in tree recruitment only was evident in interaction with tree competition.In the third chapter, I assessed the invasiveness of two exotic invasive species, Quercus rubra and Robinia pseudoacacia. My results showed that both species are able to recruit new individuals under all other species canopies, to become dominant at the expanse of many trees species and suggested that they are both expanding their ranges northwards and southwards, in part because they are relatively less sensitive to drought than the other species.All together, my results highlight that trees sensitivity to current climate change is trait-dependent and differs across species ranges. The southern part of the species ranges can be shaped by drought-induced mortality, while recruitment is much less affected by drought. This different sensitivity to climate of tree mortality and recruitment suggests that recruitment could counteract the negative effects of climate change to a certain extent and that forests might be more resilient than what was previously thought. Yet, the exotic species expansion is less affected by the surrounding environment than Mediterranean and temperate species and could benefit from climate warming. Hence, the potential help of recruitment for in-situ species range persistence, and the management strategies which could help forests to mitigate future climate change remains to be explored. Note de contenu : 1- Introduction
2- Methods
3- Occurence but not intensity of mortality rises towards the climatic trailing edge of tree species ranges in European forests
4- Recruitment in European forests is more limited by competition than drought
5- Increase of invasiveness of Quercus rubra and Robinia pseudoacacia in European forests: an approach using National Forest Inventories
6- General discussion and conclusionNuméro de notice : 28483 Affiliation des auteurs : non IGN Thématique : FORET Nature : Thèse française Note de thèse : Thèse de Doctorat : Ecologie évolutive, fonctionnelle et des communautés : Bordeaux : 2021 Organisme de stage : Laboratoire Biodiversité, Gènes & Communautés DOI : sans En ligne : https://hal.science/tel-03462635/ Format de la ressource électronique : URL Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=99187 Spatial characterization and distribution modelling of Ensete ventricosum (wild and cultivated) in Ethiopia / Meron Awoke Eshetae in Geocarto international, vol 36 n° 1 ([01/01/2021])
[article]
Titre : Spatial characterization and distribution modelling of Ensete ventricosum (wild and cultivated) in Ethiopia Type de document : Article/Communication Auteurs : Meron Awoke Eshetae, Auteur ; Binyam Tesfaw Hailu, Auteur ; Sebsebe Demissew, Auteur Année de publication : 2021 Article en page(s) : pp 60 - 75 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Analyse spatiale
[Termes IGN] distribution spatiale
[Termes IGN] données de terrain
[Termes IGN] données environnementales
[Termes IGN] entropie maximale
[Termes IGN] Ethiopie
[Termes IGN] Musa (genre)
[Termes IGN] surface cultivéeRésumé : (Auteur) Enset (Ensete ventricosum) feeds around 20 million people in Ethiopia and is arguably the most important crop for food security and rural livelihoods in the country. Therefore, it is significant to know its spatial characterization and distribution in the country. We use spatial overlay analysis and the maximum entropy (MaxEnt) model for characterizing and modelling, respectively. Inputs for the model include 26 environmental variables—19 bioclimatic and seven biophysical—in addition to the geospatial location of enset field data. The model result was validated using Receiver Operating Characteristic curve method and the area under the curve (AUC) with 0.842 for cultivated enset and 0.760 (wild enset). The highest prediction (>0.5) of both varieties occurred in the southwestern, south-central and north-eastern parts of Ethiopia—17,293.67 km2 (cultivated) and 40,402 km2 (wild) area. The presence of both enset is probabilistically higher at the tropic-cool/sub-humid Agroecological Zones. Numéro de notice : A2021-051 Affiliation des auteurs : non IGN Thématique : FORET/GEOMATIQUE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1080/10106049.2019.1588392 Date de publication en ligne : 10/06/2020 En ligne : https://doi.org/10.1080/10106049.2019.1588392 Format de la ressource électronique : URL Article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=96773
in Geocarto international > vol 36 n° 1 [01/01/2021] . - pp 60 - 75[article]Réservation
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