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An innovative and automated method for characterizing wood defects on trunk surfaces using high-density 3D terrestrial LiDAR data / Van-Tho Nguyen in Annals of Forest Science, vol 78 n° 2 (June 2021)  

Public [article]  inAnnals of Forest Science > vol 78 n° 2 (June 2021) . - Article 32 Titre : An innovative and automated method for characterizing wood defects on trunk surfaces using high-density 3D terrestrial LiDAR data Type de document : Article/Communication Auteurs : Van-Tho Nguyen, Auteur ; Thiéry Constant, Auteur ; Francis Colin, Auteur Année de publication : 2021 Article en page(s) : Article 32 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Lasergrammétrie [Termes IGN] analyse comparative [Termes IGN] apprentissage automatique [Termes IGN] détection d'anomalie [Termes IGN] données de terrain [Termes IGN] données lidar [Termes IGN] données localisées 3D [Termes IGN] écorce [Termes IGN] Fagus sylvatica [Termes IGN] qualité du bois [Termes IGN] Quercus sessiliflora [Termes IGN] segmentation d'image [Termes IGN] télémétrie laser terrestre [Termes IGN] tronc Résumé : (Auteur) We designed a novel method allowing to automatically detect and measure defects on the surface of trunks including branches, branch scars, and epicormics from terrestrial LiDAR data by using only high-density 3D information. We could automatically detect and measure the defects with a diameter as small as 0.5 cm on either oak (Quercus petraea (Matt.) Liebl.) or beech (Fagus sylvatica L.) trees that display either rough or smooth bark. Context : Ground-based light detection and ranging (LiDAR) technology describes standing trees with a high level of detail. This provides an opportunity to assess standing tree quality and to use this information in forest inventory. Assuming the availability of a very high level of detail, we could extract information about the surface defects, mainly inherited from past ramification and having a strong impact on wood quality. Aims : Within the general framework of the development of a computing method able to detect, identify, and quantify the defects on the trunk surface described from 3D data produced by a terrestrial LiDAR, this study focuses on the relevance of the whole process for two tree species with contrasted bark roughness (Quercus petraea (Matt.) Liebl. and Fagus sylvatica L.) in terms of detection, identification of the defects, and comparison with measurements performed manually on the bark surface. Methods : First, a segmentation algorithm detected singularities on the trunk surface. Next, a Random Forests machine learning algorithm identified the most probable defect type and allowed the elimination of false detections. Finally, we estimated the position, horizontal, and vertical dimensions of each defect from 3D data, and we compared them to those observed directly on the trunk by an operator. Results : The defects were detected and classified with a high accuracy with an average F1 score (harmonic mean of precision and recall) of 0.74. There were differences in computed and observed defect areas, but a much closer agreement for the number of defects. Conclusion : The information about the defects present on the trunk surface measured from terrestrial LiDAR data can be used in an automated procedure for grading standing trees or roundwoods. Numéro de notice : A2021-326 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1007/s13595-020-01022-3 Date de publication en ligne : 01/04/2021 En ligne : https://doi.org/10.1007/s13595-020-01022-3 Format de la ressource électronique : URL Article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=97484 [article]

Direct analysis in real-time (DART) time-of-flight mass spectrometry (TOFMS) of wood reveals distinct chemical signatures of two species of Afzelia / Peter Kitin in Annals of Forest Science, vol 78 n° 2 (June 2021)  

Public [article]  inAnnals of Forest Science > vol 78 n° 2 (June 2021) . - Article 31 Titre : Direct analysis in real-time (DART) time-of-flight mass spectrometry (TOFMS) of wood reveals distinct chemical signatures of two species of Afzelia Type de document : Article/Communication Auteurs : Peter Kitin, Auteur ; Edgard Espinoza, Auteur ; Hans Beeckman, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : Article 31 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Traitement d'image [Termes IGN] abattage (sylviculture) [Termes IGN] Afzelia (genre) [Termes IGN] analyse discriminante [Termes IGN] apprentissage non-dirigé [Termes IGN] bois [Termes IGN] espèce végétale [Termes IGN] forêt tropicale [Termes IGN] identification de plantes [Termes IGN] signature spectrale [Termes IGN] spectrométrie [Termes IGN] taxinomie [Termes IGN] temps réel Résumé : (Auteur) Distinct chemical fingerprints of the wood of Afzelia pachyloba and A. bipindensis demonstrated an effective method for identifying these two commercially important species. Direct analysis in real-time (DART) time-of-flight mass spectrometry (TOFMS) allowed high-throughput examination of chemotypes with vast potential in taxonomic, ecological, and forensic research of wood. Context : Afzelia is a genus of valuable tropical timber trees. Accurate identification of wood is required for the prevention of illicit timber trade as well as for certification purposes in the forest and wood products industry. For many years, particular interest has been focused on attempts to distinguish the wood of A. bipindensis Harms from A. pachyloba Harms due to substantial differences in the commercial values of these two species. Aims : We investigated if wood chemical signatures and microscopy could identify the wood of A. bipindensis and A. pachyloba. Methods : We used two approaches, namely metabolome profiling by direct analysis in real-time (DART) time-of-flight mass spectrometry (TOFMS) and wood microstructure by light microscopy and SEM. In all, we analyzed samples from 89 trees of A. bipindensis, and A. pachyloba. Results : The two species could not be separated by the IAWA standard microscopic wood features. SEM analysis showed considerable variation in the morphology of vestured pits; however, this variation was not species-specific. In contrast, DART-TOFMS followed by unsupervised statistics (Discriminant Analysis of Principal Components) showed distinct metabolome signatures of the two species. Conclusion : DART-TOFMS provides a rapid method for wood identification that can be easily applied to small heartwood samples. Time- and cost-effective classification of wood chemotypes by DART-TOFMS can have potential applications in various research questions in forestry, wood science, tree-ecophysiology, and forensics. Numéro de notice : A2021-327 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1007/s13595-020-01024-1 Date de publication en ligne : 31/03/2021 En ligne : https://doi.org/10.1007/s13595-020-01024-1 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=97488 [article]

Characterization of mixed and monospecific stands of Scots pine and Maritime pine: soil profile, physiography, climate and vegetation cover data / Daphne Lopez-Marcos in Annals of Forest Science, vol 78 n° 2 (June 2021)  

Public [article]  inAnnals of Forest Science > vol 78 n° 2 (June 2021) . - Article 28 Titre : Characterization of mixed and monospecific stands of Scots pine and Maritime pine: soil profile, physiography, climate and vegetation cover data Type de document : Article/Communication Auteurs : Daphne Lopez-Marcos, Auteur ; Maria-Belen Turrion, Auteur ; Felipe Bravo, Auteur ; Carolina Martinez-Ruiz, Auteur Année de publication : 2021 Article en page(s) : Article 28 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] composition d'un peuplement forestier [Termes IGN] couvert forestier [Termes IGN] données environnementales [Termes IGN] échantillonnage de données [Termes IGN] Espagne [Termes IGN] état du sol [Termes IGN] humidité du sol [Termes IGN] peuplement mélangé [Termes IGN] Pinus pinaster [Termes IGN] Pinus sylvestris [Vedettes matières IGN] Inventaire forestier Résumé : (Auteur) This document provides valuable environmental information about a triplets’ essay of Scots pine and Maritime pine in Spain. The dataset characterizes the soil profile (physicochemical parameters of organic and mineral horizons), climate, physiography, understory and overstory. Numéro de notice : A2021-328 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1007/s13595-021-01042-7 Date de publication en ligne : 22/03/2021 En ligne : https://doi.org/10.1007/s13595-021-01042-7 Format de la ressource électronique : URL Article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=97489 [article]

Provisioning forest and conservation science with high-resolution maps of potential distribution of major European tree species under climate change / Debojyoti Chakraborty in Annals of Forest Science, vol 78 n° 2 (June 2021)  

Public [article]  inAnnals of Forest Science > vol 78 n° 2 (June 2021) . - Article 26 Titre : Provisioning forest and conservation science with high-resolution maps of potential distribution of major European tree species under climate change Type de document : Article/Communication Auteurs : Debojyoti Chakraborty, Auteur ; Norbert Móricz, Auteur ; Ervin Rasztovits, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : Article 26 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] analyse de groupement [Termes IGN] carte forestière [Termes IGN] changement climatique [Termes IGN] conservation des ressources forestières [Termes IGN] espèce végétale [Termes IGN] Europe (géographie politique) [Termes IGN] Fagus sylvatica [Termes IGN] Larix decidua [Termes IGN] outil d'aide à la décision [Termes IGN] peuplement forestier [Termes IGN] Picea abies [Termes IGN] Pinus sylvestris [Termes IGN] Quercus pedunculata [Termes IGN] Quercus sessiliflora [Termes IGN] vulnérabilité [Vedettes matières IGN] Ecologie forestière Résumé : (Auteur) We developed a dataset of the potential distribution of seven ecologically and economically important tree species of Europe in terms of their climatic suitability with an ensemble approach while accounting for uncertainty due to model algorithms. The dataset was documented following the ODMAP protocol to ensure reproducibility. Our maps are input data in a decision support tool “SusSelect” which predicts the vulnerability of forest trees in climate change and recommends adapted planting material. Numéro de notice : A2021-329 Affiliation des auteurs : non IGN Thématique : BIODIVERSITE/FORET Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1007/s13595-021-01029-4 Date de publication en ligne : 22/03/2021 En ligne : https://doi.org/10.1007/s13595-021-01029-4 Format de la ressource électronique : URL Article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=97490 [article]