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Connecting infrared spectra with plant traits to identify species / Maria F. Buitrago in ISPRS Journal of photogrammetry and remote sensing, vol 139 (May 2018)  

Public [article]  inISPRS Journal of photogrammetry and remote sensing > vol 139 (May 2018) . - pp 183 - 200 Titre : Connecting infrared spectra with plant traits to identify species Type de document : Article/Communication Auteurs : Maria F. Buitrago, Auteur ; Andrew K. Skidmore, Auteur ; Thomas A. Groen, Auteur ; Christoph A. Hecker, Auteur Année de publication : 2018 Article en page(s) : pp 183 - 200 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes IGN] analyse discriminante [Termes IGN] arbre (flore) [Termes IGN] bande infrarouge [Termes IGN] biochimie [Termes IGN] caractérisation [Termes IGN] espèce végétale [Termes IGN] signature spectrale [Termes IGN] teneur en eau de la végétation Résumé : (Auteur) Plant traits are used to define species, but also to evaluate the health status of forests, plantations and crops. Conventional methods of measuring plant traits (e.g. wet chemistry), although accurate, are inefficient and costly when applied over large areas or with intensive sampling. Spectroscopic methods, as used in the food industry and mineralogy, are nowadays applied to identify plant traits, however, most studies analysed visible to near infrared, while infrared spectra of longer wavelengths have been little used for identifying the spectral differences between plant species. This study measured the infrared spectra (1.4–16.0 µm) on individual, fresh leaves of 19 species (from herbaceous to woody species), as well as 14 leaf traits for each leaf. The results describe at which wavelengths in the infrared the leaves’ spectra can differentiate most effectively between these plant species. A Quadratic Discrimination Analysis (QDA) shows that using five bands in the SWIR or the LWIR is enough to accurately differentiate these species (Kappa: 0.93, 0.94 respectively), while the MWIR has a lower classification accuracy (Kappa: 0.84). This study also shows that in the infrared spectra of fresh leaves, the identified species-specific features are correlated with leaf traits as well as changes in their values. Spectral features in the SWIR (1.66, 1.89 and 2.00 µm) are common to all species and match the main features of pure cellulose and lignin spectra. The depth of these features varies with changes of cellulose and leaf water content and can be used to differentiate species in this region. In the MWIR and LWIR, the absorption spectra of leaves are formed by key species-specific traits including lignin, cellulose, water, nitrogen and leaf thickness. The connection found in this study between leaf traits, features and spectral signatures are novel tools to assist when identifying plant species by spectroscopy and remote sensing. Numéro de notice : A2018-116 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.isprsjprs.2018.03.013 En ligne : https://doi.org/10.1016/j.isprsjprs.2018.03.013 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=89552 [article]

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Changes in thermal infrared spectra of plants caused by temperature and water stress / Maria F. Buitrago in ISPRS Journal of photogrammetry and remote sensing, vol 111 (January 2016)  

Public [article]  inISPRS Journal of photogrammetry and remote sensing > vol 111 (January 2016) . - pp 22 – 31 Titre : Changes in thermal infrared spectra of plants caused by temperature and water stress Type de document : Article/Communication Auteurs : Maria F. Buitrago, Auteur ; Thomas A. Groen, Auteur ; Christoph A. Hecker, Auteur ; Andrew K. Skidmore, Auteur Année de publication : 2016 Article en page(s) : pp 22 – 31 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Traitement d'image optique [Termes IGN] bruit thermique [Termes IGN] détection de changement [Termes IGN] feuille (végétation) [Termes IGN] image thermique [Termes IGN] végétation Résumé : (auteur) Environmental stress causes changes in leaves and the structure of plants. Although physiological adaptations to stress by plants have been explored, the effect of stress on the spectral properties in the thermal part of the electromagnetic spectrum (3–16 μm) has not yet been investigated. In this research two plant species (European beech, Fagus sylvatica and rhododendron, Rhododendron cf. catawbiense) that both grow naturally under temperature limited conditions were selected, representing deciduous and evergreen plants respectively. Besides TIR spectra, Leaf Water Content (LWC) and cuticle thickness were measured as possible variables that can explain the changes in TIR spectra. The results demonstrated that both species, when exposed to either water or temperature stress, showed significant changes in their TIR spectra. The changes in TIR in response to stress were similar within a species, regardless of the stress imposed on them. However, changes in TIR spectra differed between species. For rhododendron emissivity in TIR increased under stress while for beech it decreased. Both species showed depletion of Leaf Water Content (LWC) under stress, ruling LWC out as a main cause for the change in the TIR spectra. Cuticle thickness remained constant for beech, but increased for rhododendron. This suggests that changes in emissivity may be linked to changes in the cuticle thickness and possibly the structure of cuticle. It is known that spectral changes in this region have a close connection with microstructure and biochemistry of leaves. We propose detailed measurements of these changes in the cuticle to analyze the effect of microstructure on TIR spectra. Numéro de notice : A2016-038 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.isprsjprs.2015.11.003 Date de publication en ligne : 08/12/2015 En ligne : https://doi.org/10.1016/j.isprsjprs.2015.11.003 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=79517 [article]