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Auteur Fangfang Wu |
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Stem-leaf segmentation and phenotypic trait extraction of individual maize using terrestrial LiDAR data / Shichao Jin in IEEE Transactions on geoscience and remote sensing, vol 57 n° 3 (March 2019)
[article]
Titre : Stem-leaf segmentation and phenotypic trait extraction of individual maize using terrestrial LiDAR data Type de document : Article/Communication Auteurs : Shichao Jin, Auteur ; Yanjun Su, Auteur ; Fangfang Wu, Auteur ; et al., Auteur Année de publication : 2019 Article en page(s) : pp 1336 - 1346 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Lasergrammétrie
[Termes IGN] données lidar
[Termes IGN] données localisées 3D
[Termes IGN] maïs (céréale)
[Termes IGN] phénologie
[Termes IGN] segmentation en régionsRésumé : (Auteur) Accurate and high throughput extraction of crop phenotypic traits, as a crucial step of molecular breeding, is of great importance for yield increasing. However, automatic stem-leaf segmentation as a prerequisite of many precise phenotypic trait extractions is still a big challenge. Current works focus on the study of the 2-D image-based segmentation, which are sensitive to illumination and occlusion. Light detection and ranging (LiDAR) can obtain accurate 3-D information with its active laser scanning and strong penetration ability, which breaks through phenotyping from 2-D to 3-D. However, few researches have addressed the problem of the LiDAR-based stem-leaf segmentation. In this paper, we proposed a median normalized-vector growth (MNVG) algorithm, which can segment stem and leaf with four steps, i.e., preprocessing, stem growth, leaf growth, and postprocessing. The MNVG method was tested by 30 maize samples with different heights, compactness, leaf numbers, and densities from three growing stages. Moreover, phenotypic traits at leaf, stem, and individual levels were extracted with the truly segmented instances. The mean accuracy of segmentation at point level in terms of the recall, precision, F-score, and overall accuracy were 0.92, 0.93, 0.92, and 0.93, respectively. The accuracy of phenotypic trait extraction in leaf, stem, and individual levels ranged from 0.81 to 0.95, 0.64 to 0.97, and 0.96 to 1, respectively. To our knowledge, this paper proposed the first LiDAR-based stem-leaf segmentation and phenotypic trait extraction method in agriculture field, which may contribute to the study of LiDAR-based plant phonemics and precise agriculture. Numéro de notice : A2019-114 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1109/TGRS.2018.2866056 Date de publication en ligne : 19/09/2018 En ligne : https://doi.org/10.1109/TGRS.2018.2866056 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=92454
in IEEE Transactions on geoscience and remote sensing > vol 57 n° 3 (March 2019) . - pp 1336 - 1346[article]Segmenting tree crowns from terrestrial and mobile LiDAR data by exploring ecological theories / Shengli Tao in ISPRS Journal of photogrammetry and remote sensing, vol 110 (December 2015)
[article]
Titre : Segmenting tree crowns from terrestrial and mobile LiDAR data by exploring ecological theories Type de document : Article/Communication Auteurs : Shengli Tao, Auteur ; Fangfang Wu, Auteur ; Qinghua Guo, Auteur ; et al., Auteur Année de publication : 2015 Article en page(s) : pp 66 – 76 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Lasergrammétrie
[Termes IGN] croissance des arbres
[Termes IGN] données lidar
[Termes IGN] écologie forestière
[Termes IGN] segmentation d'image
[Termes IGN] télémétrie laser terrestreRésumé : (auteur) The rapid development of light detection and ranging (LiDAR) techniques is advancing ecological and forest research. During the last decade, numerous single tree segmentation techniques have been developed using airborne LiDAR data. However, accurate crown segmentation using terrestrial or mobile LiDAR data, which is an essential prerequisite for extracting branch level forest characteristics, is still challenging mainly because of the difficulties posed by tree crown intersection and irregular crown shape. In the current work, we developed a comparative shortest-path algorithm (CSP) for segmenting tree crowns scanned using terrestrial (T)-LiDAR and mobile LiDAR. The algorithm consists of two steps, namely trunk detection and subsequent crown segmentation, with the latter inspired by the well-proved metabolic ecology theory and the ecological fact that vascular plants tend to minimize the transferring distance to the root. We tested the algorithm on mobile-LiDAR-scanned roadside trees and T-LiDAR-scanned broadleaved and coniferous forests in China. Point-level quantitative assessments of the segmentation results showed that for mobile-LiDAR-scanned roadside trees, all the points were classified to their corresponding trees correctly, and for T-LiDAR-scanned broadleaved and coniferous forests, kappa coefficients ranging from 0.83 to 0.93 were obtained. We believe that our algorithm will make a contribution to solving the problem of crown segmentation in T-LiDAR scanned-forests, and might be of interest to researchers in LiDAR data processing and to forest ecologists. In addition, our research highlights the advantages of using ecological theories as guidelines for processing LiDAR data. Numéro de notice : A2015-893 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.isprsjprs.2015.10.007 En ligne : http://dx.doi.org/10.1016/j.isprsjprs.2015.10.007 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=79444
in ISPRS Journal of photogrammetry and remote sensing > vol 110 (December 2015) . - pp 66 – 76[article]