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Uncertainties in measurements of leaf optical properties are small compared to the biological variation within and between individuals of European beech / Fanny Petibon in Remote sensing of environment, vol 264 (October 2021)  

Public [article]  inRemote sensing of environment > vol 264 (October 2021) . - n° 112601 Titre : Uncertainties in measurements of leaf optical properties are small compared to the biological variation within and between individuals of European beech Type de document : Article/Communication Auteurs : Fanny Petibon, Auteur ; Ewa A. Czyż, Auteur ; Giulia Ghielmetti, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : n° 112601 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes IGN] anisotropie [Termes IGN] diagnostic foliaire [Termes IGN] échantillonnage [Termes IGN] Fagus sylvatica [Termes IGN] feuille (végétation) [Termes IGN] France (administrative) [Termes IGN] incertitude spectrale [Termes IGN] indicateur biologique [Termes IGN] phénologie [Termes IGN] réflectance spectrale [Termes IGN] réflectance végétale [Termes IGN] saison [Termes IGN] spectroradiomètre [Termes IGN] Suisse Résumé : (auteur) The measurement of leaf optical properties (LOP) using reflectance and scattering properties of light allows a continuous, time-resolved, and rapid characterization of many species traits including water status, chemical composition, and leaf structure. Variation in trait values expressed by individuals result from a combination of biological and environmental variations. Such species trait variations are increasingly recognized as drivers and responses of biodiversity and ecosystem properties. However, little has been done to comprehensively characterize or monitor such variation using leaf reflectance, where emphasis is more often on species average values. Furthermore, although a variety of platforms and protocols exist for the estimation of leaf reflectance, there is neither a standard method, nor a best practise of treating measurement uncertainty which has yet been collectively adopted. In this study, we investigate what level of uncertainty can be accepted when measuring leaf reflectance while ensuring the detection of species trait variation at several levels: within individuals, over time, between individuals, and between populations. As a study species, we use an economically and ecologically important dominant European tree species, namely Fagus sylvatica. We first use fabrics as standard material to quantify measurement uncertainties associated with leaf clip (0.0001 to 0.4 reflectance units) and integrating sphere measurements (0.0001 to 0.01 reflectance units) via error propagation. We then quantify spectrally resolved variation in reflectance from F. sylvatica leaves. We show that the measurement uncertainty associated with leaf reflectance, estimated using a field spectroradiometer with attached leaf clip, represents on average a small portion of the spectral variation within a single individual sampled over one growing season (2.7 ± 1.7%), or between individuals sampled over one week (1.5 ± 1.3% or 3.4 ± 1.7%, respectively) in a set of monitored F. sylvatica trees located in Swiss and French forests. In all forests, the spectral variation between individuals exceeded the spectral variation of a single individual at the time of the measurement. However, measurements of variation within individuals at different canopy positions over time indicate that sampling design (e.g., standardized sampling, and sample size) strongly impacts our ability to measure between-individual variation. We suggest best practice approaches toward a standardized protocol to allow for rigorous quantification of species trait variation using leaf reflectance. Numéro de notice : A2021-808 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article DOI : 10.1016/j.rse.2021.112601 Date de publication en ligne : 29/07/2021 En ligne : https://doi.org/10.1016/j.rse.2021.112601 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=98868 [article]

Impact of beam diameter and scanning approach on point cloud quality of terrestrial laser scanning in forests / Meinrad Abegg in IEEE Transactions on geoscience and remote sensing, vol 59 n° 10 (October 2021)  

Public [article]  inIEEE Transactions on geoscience and remote sensing > vol 59 n° 10 (October 2021) . - pp 8153 - 8167 Titre : Impact of beam diameter and scanning approach on point cloud quality of terrestrial laser scanning in forests Type de document : Article/Communication Auteurs : Meinrad Abegg, Auteur ; Ruedi Boesch, Auteur ; Michael E. Schaepman, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : pp 8153 - 8167 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Lasergrammétrie [Termes IGN] densité du peuplement [Termes IGN] données lidar [Termes IGN] données localisées 3D [Termes IGN] faisceau laser [Termes IGN] forêt [Termes IGN] inventaire forestier étranger (données) [Termes IGN] modélisation de la forêt [Termes IGN] qualité des données [Termes IGN] semis de points [Termes IGN] signal lidar [Termes IGN] Suisse [Termes IGN] télémétrie laser terrestre Résumé : (auteur) In recent years, portable laser scanning devices and their applications in the context of forest mensuration have undergone rapid methodological and technological developments. Devices have become smaller, lighter, and more affordable, whereas new data-driven methods and software packages have facilitated the derivation of information from point clouds. Thus, terrestrial laser scanning (TLS) is now well established, and laser–object interactions have been studied using theoretical, modeling, and experimental approaches. The representation of scanned objects in terms of accuracy and completeness is a key factor for successful feature extraction. Still, little is known about the influence of TLS and survey properties on point clouds in complex scattering environments, such as forests. In this study, we investigate the influence of laser beam diameter and signal triggering on the quality of point clouds in forested environments. Based on the Swiss National Forest Inventory data, we simulate the TLS measurements in 684 virtual forest stands using a 3-D content creation suite. We show that small objects lack sufficient representation in the point cloud and they are further negatively influenced by large laser beam diameters, dense stands, and large distances from the scanning device. We provide simulations that make it possible to derive a rationale for decisions regarding the appropriate choice of TLS device and survey configuration for forest inventories. Numéro de notice : A2021-709 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article DOI : 10.1109/TGRS.2020.3037763 Date de publication en ligne : 08/12/2020 En ligne : https://doi.org/10.1109/TGRS.2020.3037763 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=98608 [article]

Stochastic super-resolution for downscaling time-evolving atmospheric fields with a generative adversarial network / Jussi Leinonen in IEEE Transactions on geoscience and remote sensing, Vol 59 n° 9 (September 2021)  

Public [article]  inIEEE Transactions on geoscience and remote sensing > Vol 59 n° 9 (September 2021) . - pp 7211 - 7223 Titre : Stochastic super-resolution for downscaling time-evolving atmospheric fields with a generative adversarial network Type de document : Article/Communication Auteurs : Jussi Leinonen, Auteur ; Daniele Nerini, Auteur ; Alexis Berne, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : pp 7211 - 7223 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Traitement d'image optique [Termes IGN] données météorologiques [Termes IGN] épaisseur de nuage [Termes IGN] image à basse résolution [Termes IGN] image GOES [Termes IGN] modèle atmosphérique [Termes IGN] précipitation [Termes IGN] processus stochastique [Termes IGN] réduction d'échelle [Termes IGN] réseau antagoniste génératif [Termes IGN] réseau neuronal convolutif [Termes IGN] Suisse Résumé : (auteur) Generative adversarial networks (GANs) have been recently adopted for super-resolution, an application closely related to what is referred to as “downscaling” in the atmospheric sciences: improving the spatial resolution of low-resolution images. The ability of conditional GANs to generate an ensemble of solutions for a given input lends itself naturally to stochastic downscaling, but the stochastic nature of GANs is not usually considered in super-resolution applications. Here, we introduce a recurrent, stochastic super-resolution GAN that can generate ensembles of time-evolving high-resolution atmospheric fields for an input consisting of a low-resolution sequence of images of the same field. We test the GAN using two data sets: one consisting of radar-measured precipitation from Switzerland; the other of cloud optical thickness derived from the Geostationary Earth Observing Satellite 16 (GOES-16). We find that the GAN can generate realistic, temporally consistent super-resolution sequences for both data sets. The statistical properties of the generated ensemble are analyzed using rank statistics, a method adapted from ensemble weather forecasting; these analyses indicate that the GAN produces close to the correct amount of variability in its outputs. As the GAN generator is fully convolutional, it can be applied after training to input images larger than the images used to train it. It is also able to generate time series much longer than the training sequences, as demonstrated by applying the generator to a three-month data set of the precipitation radar data. The source code to our GAN is available at https://github.com/jleinonen/downscaling-rnn-gan. Numéro de notice : A2021-645 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1109/TGRS.2020.3032790 Date de publication en ligne : 02/11/2020 En ligne : https://doi.org/10.1109/TGRS.2020.3032790 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=98349 [article]

Spatial patterns of living and dead small trees in subalpine Norway spruce forest reserves in Switzerland / Eva Bianchi in Forest ecology and management, vol 494 (15 August 2021)  

Public [article]  inForest ecology and management > vol 494 (15 August 2021) . - n° 119315 Titre : Spatial patterns of living and dead small trees in subalpine Norway spruce forest reserves in Switzerland Type de document : Article/Communication Auteurs : Eva Bianchi, Auteur ; Harald Bugmann, Auteur ; Martina Lena Hobi, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : n° 119315 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] analyse de groupement [Termes IGN] distance [Termes IGN] espace topologique [Termes IGN] fonction K de Ripley [Termes IGN] forêt alpestre [Termes IGN] forêt subalpine [Termes IGN] mortalité [Termes IGN] Picea abies [Termes IGN] régénération (sylviculture) [Termes IGN] réserve forestière [Termes IGN] Suisse [Termes IGN] topographie locale [Termes IGN] voisinage (topologie) [Vedettes matières IGN] Ecologie forestière Résumé : (auteur) Spatial patterns can reveal a lot about ecological processes, but our knowledge of the spatial ecology of tree regeneration at a fine scale is quite limited. Therefore, we studied the spatial patterns of living and dead small trees in two subalpine Norway spruce forest reserves in Switzerland (Scatlè and Bödmerenwald) using three types of analyses. First, we investigated the distances of small trees to the nearest large neighboring tree and, by using maximum distances as indicator, inferred the size of forest gaps, detecting mainly forest gaps of small size, although with two exceptions that were driven by large-scale disturbances. Second, we accounted for spatial inhomogeneity in the pattern of small and large trees (i.e., variations in local tree densities) by including environmental covariates in point pattern models. Latitude (within the forest reserve), elevation and aspect contributed significantly to explaining the density of living and dead small trees, and partly of living and dead large trees. Yet, the influence of these environmental covariates varied between the two reserves due to their different topography and peculiar site conditions. Third, we analyzed neighborhood interactions between small and large trees based on the vicinity and size of trees. In both forest reserves, small living trees were randomly dispersed around large dead trees over a broad range of distances and, at certain distances in one reserve, even dispersed away from them. Small living trees further showed clustering around large living trees at short distances and dispersion at large distances. Small dead trees featured mainly a random pattern, although with a tendency to cluster around large neighbors at short distances, irrespective whether these were living or dead. Yet, the weakening of clustering with increasing distances indicates that the influence of large trees on small trees varies with spatial scale and thus that these neighborhood interactions are scale-dependent. Overall, our study contributes to a better understanding of the spatial ecology of mortality in small trees and ultimately of tree regeneration processes and stand dynamics in mountain forests. Numéro de notice : A2021-583 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.foreco.2021.119315 Date de publication en ligne : 11/05/2021 En ligne : https://doi.org/10.1016/j.foreco.2021.119315 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=98198 [article]

Calibration of the process-based model 3-PG for major central European tree species / David I. Forrester in European Journal of Forest Research, vol 140 n° 4 (August 2021)  

Public [article]  inEuropean Journal of Forest Research > vol 140 n° 4 (August 2021) . - pp 847 - 868 Titre : Calibration of the process-based model 3-PG for major central European tree species Type de document : Article/Communication Auteurs : David I. Forrester, Auteur ; Martina Lena Hobi, Auteur ; Amanda S. Mathys, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : pp 847 - 868 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] biomasse forestière [Termes IGN] changement climatique [Termes IGN] estimation bayesienne [Termes IGN] étalonnage de modèle [Termes IGN] Europe centrale [Termes IGN] inventaire forestier étranger (données) [Termes IGN] modèle de croissance végétale [Termes IGN] modélisation de la forêt [Termes IGN] peuplement mélangé [Termes IGN] régression [Termes IGN] Suisse [Vedettes matières IGN] Inventaire forestier Résumé : (auteur) Process-based forest models are important tools for predicting forest growth and their vulnerability to factors such as climate change or responses to management. One of the most widely used stand-level process-based models is the 3-PG model (Physiological Processes Predicting Growth), which is used for applications including estimating wood production, carbon budgets, water balance and susceptibility to climate change. Few 3-PG parameter sets are available for central European species and even fewer are appropriate for mixed-species forests. Here we estimated 3-PG parameters for twelve major central European tree species using 1418 long-term permanent forest monitoring plots from managed forests, 297 from un-managed forest reserves and 784 Swiss National Forest Inventory plots. A literature review of tree physiological characteristics, as well as regression analyses and Bayesian inference, were used to calculate the 3-PG parameters. The Swiss-wide calibration, based on monospecific plots, showed a robust performance in predicting forest stocks such as stem, foliage and root biomass. The plots used to inform the Bayesian calibration resulted in posterior ranges of the calibrated parameters that were, on average, 69% of the prior range. The bias of stem, foliage and root biomass predictions was generally less than 20%, and less than 10% for several species. The parameter sets also provided reliable predictions of biomass and mean tree sizes in mixed-species forests. Given that the information sources used to develop the parameters included a wide range of climatic, edaphic and management conditions and long time spans (from 1930 to present), these species parameters for 3-PG are likely to be appropriate for most central European forests and conditions. Numéro de notice : A2021-717 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article DOI : 10.1007/s10342-021-01370-3 Date de publication en ligne : 18/03/2021 En ligne : https://doi.org/10.1007/s10342-021-01370-3 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=98630 [article]

Self-thinning tree mortality models that account for vertical stand structure, species mixing and climate / David I. Forrester in Forest ecology and management, Vol 487 ([01/05/2021])  

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Long-term tree species population dynamics in Swiss forest reserves influenced by forest structure and climate / Amanda S. Mathys in Forest ecology and management, vol 481 (February 2021)  

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A quantitative assessment of rockfall influence on forest structure in the Swiss Alps / Christine Moos in European Journal of Forest Research, vol 140 n° 1 (February 2021)  

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Stand-scale climate change impacts on forests over large areas: transient responses and projection uncertainties / NIca Huber in Ecological Applications, vol 31 ([01/02/2021])  

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From point clouds to high-fidelity models - advanced methods for image-based 3D reconstruction / Audrey Richard (2021)  

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Spatio-temporal relationship between land cover and land surface temperature in urban areas: A case study in Geneva and Paris / Xu Ge in ISPRS International journal of geo-information, vol 9 n° 10 (October 2020)  

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Predicting biomass dynamics at the national extent from digital aerial photogrammetry / Bronwyn Price in International journal of applied Earth observation and geoinformation, vol 90 (August 2020)  

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Can we characterize river corridor evolution at a continental scale from historical topographic maps? A first assessment from the comparison of four countries / J. Horacio Garcia in River Research and Applications, vol 36 n° 6 (July 2020)  

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Analysing the quality of Swiss National Forest Inventory measurements of woody species richness / Berthold Traub in Forest ecosystems, vol 7 (2020)  

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Morphological tessellation as a way of partitioning space: Improving consistency in urban morphology at the plot scale / Martin Fleischmann in Computers, Environment and Urban Systems, vol 80 (March 2020)  

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