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Deep learning for conifer/deciduous classification of airborne LiDAR 3D point clouds representing individual trees / Hamid Hamraz in ISPRS Journal of photogrammetry and remote sensing, Vol 158 (December 2019)  

Public [article]  inISPRS Journal of photogrammetry and remote sensing > Vol 158 (December 2019) . - pp 219 - 230 Titre : Deep learning for conifer/deciduous classification of airborne LiDAR 3D point clouds representing individual trees Type de document : Article/Communication Auteurs : Hamid Hamraz, Auteur ; Nathan B. Jacobs, Auteur ; Marco A. Contreras, Auteur ; Chase H. Clark, Auteur Année de publication : 2019 Article en page(s) : pp 219 - 230 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Lasergrammétrie [Termes descripteurs IGN] apprentissage profond [Termes descripteurs IGN] arbre caducifolié [Termes descripteurs IGN] classification par réseau neuronal convolutif [Termes descripteurs IGN] données d'apprentissage [Termes descripteurs IGN] données lidar [Termes descripteurs IGN] données localisées 3D [Termes descripteurs IGN] houppier [Termes descripteurs IGN] modèle numérique de surface [Termes descripteurs IGN] pinophyta [Termes descripteurs IGN] semis de points Résumé : (auteur) The purpose of this study was to investigate the use of deep learning for coniferous/deciduous classification of individual trees segmented from airborne LiDAR data. To enable processing by a deep convolutional neural network (CNN), we designed two discrete representations using leaf-off and leaf-on LiDAR data: a digital surface model with four channels (DSM × 4) and a set of four 2D views (4 × 2D). A training dataset of tree crowns was generated via segmentation of tree crowns, followed by co-registration with field data. Potential mislabels due to GPS error or tree leaning were corrected using a statistical ensemble filtering procedure. Because the training data was heavily unbalanced (~8% conifers), we trained an ensemble of CNNs on random balanced sub-samples. Benchmarked against multiple traditional shallow learning methods using manually designed features, the CNNs improved accuracies up to 14%. The 4 × 2D representation yielded similar classification accuracies to the DSM × 4 representation (~82% coniferous and ~90% deciduous) while converging faster. Further experimentation showed that early/late fusion of the channels in the representations did not affect the accuracies in a significant way. The data augmentation that was used for the CNN training improved the classification accuracies, but more real training instances (especially coniferous) likely results in much stronger improvements. Leaf-off LiDAR data were the primary source of useful information, which is likely due to the perennial nature of coniferous foliage. LiDAR intensity values also proved to be useful, but normalization yielded no significant improvement. As we observed, large training data may compensate for the lack of a subset of important domain data. Lastly, the classification accuracies of overstory trees (~90%) were more balanced than those of understory trees (~90% deciduous and ~65% coniferous), which is likely due to the incomplete capture of understory tree crowns via airborne LiDAR. In domains like remote sensing and biomedical imaging, where the data contain a large amount of information and are not friendly to human visual system, human-designed features may become suboptimal. As exemplified by this study, automatic, objective derivation of optimal features via deep learning can improve prediction tasks in such domains. Numéro de notice : A2019-547 Thématique : FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.isprsjprs.2019.10.011 date de publication en ligne : 03/11/2019 En ligne : https://doi.org/10.1016/j.isprsjprs.2019.10.011 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=94192 [article]

Phosphorus availability in relation to soil properties and forest productivity in Pinus sylvestris L. plantations / Teresa Bueis in Annals of Forest Science [en ligne], Vol 76 n° 4 (December 2019)  

Public [article]  inAnnals of Forest Science [en ligne] > Vol 76 n° 4 (December 2019) Titre : Phosphorus availability in relation to soil properties and forest productivity in Pinus sylvestris L. plantations Type de document : Article/Communication Auteurs : Teresa Bueis, Auteur ; Felipe Bravo, Auteur ; Valentin Pando, Auteur ; et al., Auteur Année de publication : 2019 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes descripteurs IGN] biomasse forestière [Termes descripteurs IGN] écosystème forestier [Termes descripteurs IGN] Espagne [Termes descripteurs IGN] industrie forestière [Termes descripteurs IGN] phosphore [Termes descripteurs IGN] Pinus sylvestris [Vedettes matières IGN] Ecologie forestière Résumé : (auteur) Key message : Pinus sylvestris L. productivity in Spanish plantations is driven by P availability, which, in turn, is determined by the activity of soil microorganisms, responsible for inorganic P solubilization; Fe and Al contents, responsible for P retention; and organic matter, which is source of organic P, inhibits its precipitation as insoluble compounds, and reduces P retention. Context : Phosphorus is often a limiting nutrient in forest ecosystems mainly due to the low solubility of P compounds and the sorption processes occurring in soils. Aims : The main aims of this work were to evaluate soil P availability, to assess which soil properties are driving P availability, and to study whether soil P availability is determining forest productivity in Pinus sylvestris L. plantations in Northern Spain. Methods : Soil properties and forest productivity were studied in 34 plots located in monospecific P. sylvestris plantations. Tiessen and Moir (Canadian Society of Soil Science 75–86, 1993) sequential fractionation method was carried out to determine different forms of soil P and to provide a comprehensive assessment of available P in soils. To explore the relationships between these variables, canonical correlation analyses and Pearson’s correlations were studied. Results : Significant correlations were found between P fractions and soil properties related to Fe and Al contents, organic matter, and microbial biomass. Besides, significant correlations were found between site index and the studied P fractions except for P extracted with anion exchange membrane (PAEM) and the recalcitrant P fraction. Conclusion : In the studied soils, P availability is low and the predominant fractions of P are the recalcitrant forms. Aluminum and iron contents in the soils studied play an important role in sorption processes related to the highly and moderately labile P fractions and the organic phosphorus. P availability seems to be regulated by both processes: biochemical mineralization, where phosphatase activity is relevant, and biological mineralization of the soil organic matter. Phosphorus availability affects forest productivity in the Pinus sylvestris plantations studied. Numéro de notice : A2019-531 Thématique : FORET Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1007/s13595-019-0882-3 date de publication en ligne : 18/10/2019 En ligne : https://doi.org/10.1007/s13595-019-0882-3 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=94119 [article]

Estimating pasture biomass and canopy height in brazilian savanna using UAV photogrammetry / Juliana Batistoti in Remote sensing, Vol 11 n° 20 (2 October 2019)  

Public [article]  inRemote sensing > Vol 11 n° 20 (2 October 2019) . - 12 p. Titre : Estimating pasture biomass and canopy height in brazilian savanna using UAV photogrammetry Type de document : Article/Communication Auteurs : Juliana Batistoti, Auteur ; José Marcato, Auteur ; Luis Itavo, Auteur ; et al., Auteur Année de publication : 2019 Article en page(s) : 12 p. Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications photogrammétriques [Termes descripteurs IGN] biomasse [Termes descripteurs IGN] Brésil [Termes descripteurs IGN] canopée [Termes descripteurs IGN] couvert végétal [Termes descripteurs IGN] hauteur des arbres [Termes descripteurs IGN] image à haute résolution [Termes descripteurs IGN] image de drone [Termes descripteurs IGN] image RVB [Termes descripteurs IGN] modèle numérique de surface de la canopée [Termes descripteurs IGN] modèle numérique de terrain [Termes descripteurs IGN] Poaceae [Termes descripteurs IGN] point d'appui [Termes descripteurs IGN] positionnement cinématique en temps réel Résumé : (auteur) The Brazilian territory contains approximately 160 million hectares of pastures, and it is necessary to develop techniques to automate their management and increase their production. This technical note has two objectives: First, to estimate the canopy height using unmanned aerial vehicle (UAV) photogrammetry; second, to propose an equation for the estimation of biomass of Brazilian savanna (Cerrado) pastures based on UAV canopy height. Four experimental units of Panicum maximum cv. BRS Tamani were evaluated. Herbage mass sampling, height measurements, and UAV image collection were simultaneously performed. The UAVs were flown at a height of 50 m, and images were generated with a mean ground sample distance (GSD) of approximately 1.55 cm. The forage canopy height estimated by UAVs was calculated as the difference between the digital surface model (DSM) and the digital terrain model (DTM). The R2 between ruler height and UAV height was 0.80; between biomass (kg ha−1 GB—green biomass) and ruler height, 0.81; and between biomass (kg ha−1 GB) and UAV height, 0.74. UAV photogrammetry proved to be a potential technique to estimate height and biomass in Brazilian Panicum maximum cv. BRS Tamani pastures located in the endangered Brazilian savanna (Cerrado) biome Numéro de notice : A2019-556 Thématique : IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.3390/rs11202447 date de publication en ligne : 22/10/2019 En ligne : https://doi.org/10.3390/rs11202447 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=94212 [article]

Automatic canola mapping using time series of Sentinel 2 images / Davoud Ashourloo in ISPRS Journal of photogrammetry and remote sensing, vol 156 (October 2019)  

Public [article]  inISPRS Journal of photogrammetry and remote sensing > vol 156 (October 2019) . - pp 63 - 76 Titre : Automatic canola mapping using time series of Sentinel 2 images Type de document : Article/Communication Auteurs : Davoud Ashourloo, Auteur ; Hamid Salehi Shahrabi, Auteur ; Mohsen Azadbakht, Auteur ; Hossein Aghighi, Auteur ; Hamed Nematollahi, Auteur ; Abbas Alimohammadi, Auteur ; Ali Akbar Matkan, Auteur Année de publication : 2019 Article en page(s) : pp 63 - 76 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes descripteurs IGN] agriculture de précision [Termes descripteurs IGN] Brassica napus subsp. napus [Termes descripteurs IGN] image proche infrarouge [Termes descripteurs IGN] image RVB [Termes descripteurs IGN] image Sentinel-MSI [Termes descripteurs IGN] Iran [Termes descripteurs IGN] Normalized Difference Vegetation Index [Termes descripteurs IGN] Oklahoma (Etats-Unis) [Termes descripteurs IGN] rendement agricole [Termes descripteurs IGN] série temporelle Résumé : (Auteur) Different techniques utilized for mapping various crops are mainly based on using training dataset. But, due to difficulties of access to a well-represented training data, development of automatic methods for detection of crops is an important need which has not been considered as it deserves. Therefore, main objective of present study was to propose a new automatic method for canola (Brassica napus L.) mapping based on Sentinel 2 satellite time series data. Time series data of three study sites in Iran (Moghan, Gorgan, Qazvin) and one site in USA: (Oklahoma), were used. Then, spectral reflectance values of canola in various spectral bands were compared with those of the other crops during the growing season. NDVI, Red and Green spectral bands were successfully applied for automatic identification of canola flowering date using the threshold values. Examination of the fisher function indicated that multiplication of the near-infrared (NIR) band by the sum of red and green bands during the flowering date is an efficient index to differentiate canola from the other crops. The Kappa and overall accuracy (OA) for the four study sites were more than 0.75 and 88%, respectively. Results of this research demonstrated the potential of the proposed approach for canola mapping using time series of remotely sensed data. Numéro de notice : A2019-317 Thématique : FORET/IMAGERIE Nature : Article DOI : 10.1016/j.isprsjprs.2019.08.007 date de publication en ligne : 09/08/2019 En ligne : https://doi.org/10.1016/j.isprsjprs.2019.08.007 Format de la ressource électronique : URL Article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=93355 [article]

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Mapping dead forest cover using a deep convolutional neural network and digital aerial photography / Jean-Daniel Sylvain in ISPRS Journal of photogrammetry and remote sensing, vol 156 (October 2019)  

Public [article]  inISPRS Journal of photogrammetry and remote sensing > vol 156 (October 2019) . - pp 14 - 26 Titre : Mapping dead forest cover using a deep convolutional neural network and digital aerial photography Type de document : Article/Communication Auteurs : Jean-Daniel Sylvain, Auteur ; Guillaume Drolet, Auteur ; Nicolas Brown, Auteur Année de publication : 2019 Article en page(s) : pp 14 - 26 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Traitement d'image optique [Termes descripteurs IGN] apprentissage profond [Termes descripteurs IGN] arbre mort [Termes descripteurs IGN] base de données forestières [Termes descripteurs IGN] classification par réseau neuronal convolutif [Termes descripteurs IGN] couvert forestier [Termes descripteurs IGN] feuillu [Termes descripteurs IGN] forêt boréale [Termes descripteurs IGN] image aérienne [Termes descripteurs IGN] orthoimage [Termes descripteurs IGN] peuplement mélangé [Termes descripteurs IGN] pinophyta [Termes descripteurs IGN] Québec (Canada) [Termes descripteurs IGN] santé des forêts Résumé : (Auteur) Tree mortality is an important forest ecosystem variable having uses in many applications such as forest health assessment, modelling stand dynamics and productivity, or planning wood harvesting operations. Because tree mortality is a spatially and temporally erratic process, rates and spatial patterns of tree mortality are difficult to estimate with traditional inventory methods. Remote sensing imagery has the potential to detect tree mortality at spatial scales required for accurately characterizing this process (e.g., landscape, region). Many efforts have been made in this sense, mostly using pixel- or object-based methods. In this study, we explored the potential of deep Convolutional Neural Networks (CNNs) to detect and map tree health status and functional type over entire regions. To do this, we built a database of around 290,000 photo-interpreted trees that served to extract and label image windows from 20 cm-resolution digital aerial images, for use in CNN training and evaluation. In this process, we also evaluated the effect of window size and spectral channel selection on classification accuracy, and we assessed if multiple realizations of a CNN, generated using different weight initializations, can be aggregated to provide more robust predictions. Finally, we extended our model with 5 additional classes to account for the diversity of landcovers found in our study area. When predicting tree health status only (live or dead), we obtained test accuracies of up to 94%, and up to 86% when predicting functional type only (broadleaf or needleleaf). Channel selection had a limited impact on overall classification accuracy, while window size increased the ability of the CNNs to predict plant functional type. The aggregation of multiple realizations of a CNN allowed us to avoid the selection of suboptimal models and help to remove much of the speckle effect when predicting on new aerial images. Test accuracies of plant functional type and health status were not affected in the extended model and were all above 95% for the 5 extra classes. Our results demonstrate the robustness of the CNN for between-scene variations in aerial photography and also suggest that this approach can be applied at operational level to map tree mortality across extensive territories. Numéro de notice : A2019-316 Thématique : FORET/IMAGERIE Nature : Article DOI : 10.1016/j.isprsjprs.2019.07.010 date de publication en ligne : 02/08/2019 En ligne : https://doi.org/10.1016/j.isprsjprs.2019.07.010 Format de la ressource électronique : URL Article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=93353 [article]

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Multi-sensor prediction of Eucalyptus stand volume: A support vector approach / Guilherme Silverio Aquino de Souza in ISPRS Journal of photogrammetry and remote sensing, vol 156 (October 2019)  

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Transferability and calibration of airborne laser scanning based mixed-effects models to estimate the attributes of sawlog-sized Scots pines / Lauri Korhonen in Silva fennica, vol 53 n° 3 (2019)  

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Unmanned aerial vehicles (UAVs) for monitoring macroalgal biodiversity: comparison of RGB and multispectral imaging sensors for biodiversity assessments / Leigh Tait in Remote sensing, vol 11 n° 19 (October 2019)  

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Contribution à la connaissance phytosociologique de la végétation du pays de Sault (département de l’Aude, France) / Bruno de Foucault in Evaxiana, n° 6 (2019)

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La succession végétale dans les Landes de Gascogne et la position de l’Avoine de Thore (Pseudarrhenatherum longifolium) / Pierre Lafon in Evaxiana, n° 6 (2019)

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Increasing temperatures over an 18-year period shortens growing season length in a beech (Fagus sylvatica L.)-dominated forest / Quentin Hurdebise in Annals of Forest Science [en ligne], Vol 76 n° 3 (September 2019)  

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Size-density trajectories for even-aged sessile oak (Quercus petraea (Matt.) Liebl.) and common beech (Fagus sylvatica L.) stands revealing similarities and differences in the mortality process / François Ningre in Annals of Forest Science [en ligne], Vol 76 n° 3 (September 2019)  

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The relationship between climate and the intra-annual oxygen isotope patterns from pine trees: a case study along an elevation gradient on Corsica, France / Sonja Szymczak in Annals of Forest Science [en ligne], Vol 76 n° 3 (September 2019)  

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The utility of terrestrial photogrammetry for assessment of tree volume and taper in boreal mixedwood forests / Christopher Mulverhill in Annals of Forest Science [en ligne], Vol 76 n° 3 (September 2019)  

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A generalized space-time OBIA classification scheme to map sugarcane areas at regional scale, using Landsat images time-series and the random forest algorithm / Ana Claudia Dos Santos Luciano in International journal of applied Earth observation and geoinformation, vol 80 (August 2019)  

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