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Modeling strawberry biomass and leaf area using object-based analysis of high-resolution images / Zhen Guan in ISPRS Journal of photogrammetry and remote sensing, vol 163 (May 2020)  

Public [article]  inISPRS Journal of photogrammetry and remote sensing > vol 163 (May 2020) . - pp 171 - 186 Titre : Modeling strawberry biomass and leaf area using object-based analysis of high-resolution images Type de document : Article/Communication Auteurs : Zhen Guan, Auteur ; Amr Abd-Elrahman, Auteur ; Zhen Fan, Auteur ; et al., Auteur Année de publication : 2020 Article en page(s) : pp 171 - 186 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes descripteurs IGN] analyse d'image orientée objet [Termes descripteurs IGN] biomasse [Termes descripteurs IGN] canopée [Termes descripteurs IGN] données spatiotemporelles [Termes descripteurs IGN] hauteur de la végétation [Termes descripteurs IGN] image à haute résolution [Termes descripteurs IGN] indice foliaire [Termes descripteurs IGN] orthophotoplan numérique [Termes descripteurs IGN] phénologie [Termes descripteurs IGN] semis de points [Termes descripteurs IGN] structure-from-motion Résumé : (auteur) Quantifying canopy biophysical parameters is critical to agricultural research and farm management. In this study, strawberry dry biomass and leaf area were modeled statistically using high spatial and temporal resolution imagery. A mobile field data acquisition system was used to acquire thousands of very high resolution (~0.5 mm) close-range images seven times throughout the strawberry growing season. Ortho-mosaics and dense point clouds were generated through Structure from Motion (SfM) and used in Object-Based Image Analysis (OBIA) at the sub-leaf level to extract canopy structure variables such as planimetric canopy area, canopy average height, and canopy smoothness metric. Regression analysis was carried out using these image-derived canopy variables as predictors to model leaf area ( = 0.79; ten-fold cross-validation RMSE = 0.056 m2) and dry biomass ( = 0.84; ten-fold cross-validation RMSE = 7.72 g) obtained through destructive measurements. Results indicate consistent predictive power through the season and across 17 strawberry genotypes. The study showed that the canopy smoothness metric developed in this study as an indicator of canopy density could complement other variables (planimetric canopy area, canopy average height) that describe canopy geometric properties. Numéro de notice : A2020-139 Thématique : IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.isprsjprs.2020.02.021 date de publication en ligne : 18/03/2020 En ligne : https://doi.org/10.1016/j.isprsjprs.2020.02.021 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=94757 [article]

Temporal Validation of Four LAI Products over Grasslands in the Northeastern Tibetan Plateau / Gaofei Yin in Photogrammetric Engineering & Remote Sensing, PERS, vol 86 n° 4 (April 2020)  

Public [article]  inPhotogrammetric Engineering & Remote Sensing, PERS > vol 86 n° 4 (April 2020) . - pp 225 - 233 Titre : Temporal Validation of Four LAI Products over Grasslands in the Northeastern Tibetan Plateau Type de document : Article/Communication Auteurs : Gaofei Yin, Auteur ; Ainong Li, Auteur ; Zhengjian Zhang, Auteur ; Guangbin Lei, Auteur Année de publication : 2020 Article en page(s) : pp 225 - 233 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes descripteurs IGN] analyse comparative [Termes descripteurs IGN] corrélation d'images [Termes descripteurs IGN] GRASS [Termes descripteurs IGN] image MODIS [Termes descripteurs IGN] Leaf Area Index [Termes descripteurs IGN] plateau [Termes descripteurs IGN] série temporelle [Termes descripteurs IGN] température au sol [Termes descripteurs IGN] Tibet Résumé : (Auteur) Time series of leaf area index (LAI) products are now widely used, and the temporal validation is the prerequisite for their proper application. However, a systematical comparison between different products using both direct and indirect methods is still lacking. The objective of this paper is to assess and compare the temporal performances of four LAI products: Moderate Resolution Imaging Spectroradiometer (MODIS) LAI (MOD)15A2, MOD15A2h, Geoland2 Version 1 (GEOV1), and Global Land Surface Satellite (GLASS). The study area, which is dominated by grasslands, is located in the northeastern Tibetan Plateau (TP), and temperature is the main stress factor affecting grass growth. Both a correlation analysis with temperature and a direct comparison with temporally continuous LAI reference maps were implemented in our temporal validation experiments. The results show that no single product can capture the rapid change and the seasonal trend in LAI simultaneously, and the compositing period used in each product determines the quality of the corresponding LAI time series. The MOD15A2 and MOD15A2h products, which have short compositing windows (eight days), are suitable for detecting rapid change. A grazing-induced biomass decrease that occurred around day of year 205 in 2014 in our study area was clearly revealed in these two products. For the GEOV1 and GLASS products, which have compositing windows of 30 days and 1 year, respectively, the grazing date was shifted (GEOV1) or even invisible (GLASS). However, products with prolonged compositing windows may be more robust to observation noise, and the resulting products may be suitable for capturing the seasonal trend. This study highlights that the concurrent use of data from various sensors onboard different satellites, and the introduction of new generations of satellites (e.g., Gaofen-6), are two promising ways to further improve existing LAI time series. Numéro de notice : A2020-129 Thématique : FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.14358/PERS.86.4.225 date de publication en ligne : 01/04/2020 En ligne : https://doi.org/10.14358/PERS.86.4.225 Format de la ressource électronique : URL Article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=94804 [article]

Red-edge band vegetation indices for leaf area index estimation from Sentinel-2/MSI imagery / Yuanheng Sun in IEEE Transactions on geoscience and remote sensing, vol 58 n° 2 (February 2020)  

Public [article]  inIEEE Transactions on geoscience and remote sensing > vol 58 n° 2 (February 2020) . - pp 826 - 840 Titre : Red-edge band vegetation indices for leaf area index estimation from Sentinel-2/MSI imagery Type de document : Article/Communication Auteurs : Yuanheng Sun, Auteur ; Qiming Qin, Auteur ; Huazhong Ren, Auteur ; et al., Auteur Année de publication : 2020 Article en page(s) : pp 826 - 840 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Traitement d'image optique [Termes descripteurs IGN] bande rouge [Termes descripteurs IGN] canopée [Termes descripteurs IGN] Chine [Termes descripteurs IGN] image multibande [Termes descripteurs IGN] image proche infrarouge [Termes descripteurs IGN] image Sentinel-MSI [Termes descripteurs IGN] indice de végétation [Termes descripteurs IGN] indice foliaire [Termes descripteurs IGN] Normalized Difference Vegetation Index [Termes descripteurs IGN] teneur en chlorophylle des feuilles Résumé : (auteur) The estimation of leaf area index (LAI) from optical remotely sensed data based on vegetation indices (VIs) is a quick and practical approach to acquire LAI over vast areas. Reflectance in the red-edge bands is sensitive to vegetation status, and its information is thought to be useful in agricultural applications. Based on three red-edge band observations (represented as RE1, RE2, and RE3 for bands 5–7) from the Multispectral Instrument (MSI) onboard the Sentinel-2 satellite, this article aims to investigate the feasibility and performance of using red-edge bands for LAI estimates with the VI method and ground-measured LAI data sets. Sensitivity analysis from PROSAIL simulations revealed that RE1 is mainly affected by the influence of the leaf chlorophyll content, and this uncertainty should not be ignored during LAI estimation. For the normalized difference vegetation index (NDVI), modified simple ratio (MSR), chlorophyll index (CI), and wide dynamic range vegetation index (WDRVI), the optimal combination of Sentinel-2 bands for LAI estimation was RE2 and RE3, with a minimum root-mean-square error (RMSE) of 0.75. Four 3-band red-edge VIs were proposed to exploit the full content of the red-edge bands of Sentinel-2, and their performance in LAI estimation improved slightly. However, both 2-band red-edge VIs and 3-band red-edge VIs remained slightly saturated at high LAI levels; therefore, a segmental estimation with a threshold was suggested for large LAIs. The results indicate that the optimal 2-band red-edge VIs and proposed 3-band red-edge VIs are effective tools for crop LAI estimation in multiple-growth stages with Sentinel-2 MSI images. Numéro de notice : A2020-069 Thématique : IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1109/TGRS.2019.2940826 date de publication en ligne : 27/09/2019 En ligne : http://doi.org/10.1109/TGRS.2019.2940826 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=94615 [article]

Combination of linear regression lines to Understand the response of Sentinel-1 dual polarization SAR data with crop phenology—case study in Miyazaki, Japan / Emal Wali in Remote sensing, vol 12 n°1 (January 2020)  

Public [article]  inRemote sensing > vol 12 n°1 (January 2020) . - 17 p. Titre : Combination of linear regression lines to Understand the response of Sentinel-1 dual polarization SAR data with crop phenology—case study in Miyazaki, Japan Type de document : Article/Communication Auteurs : Emal Wali, Auteur ; Masahiro Tasumi, Auteur ; Masao Moriyama, Auteur Année de publication : 2020 Article en page(s) : 17 p. Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes descripteurs IGN] biomasse [Termes descripteurs IGN] coefficient de rétrodiffusion [Termes descripteurs IGN] image radar moirée [Termes descripteurs IGN] image Sentinel-SAR [Termes descripteurs IGN] indice foliaire [Termes descripteurs IGN] Japon [Termes descripteurs IGN] polarisation [Termes descripteurs IGN] régression linéaire [Termes descripteurs IGN] rizière [Termes descripteurs IGN] surveillance agricole [Termes descripteurs IGN] variable biophysique (végétation) Résumé : (auteur) This study investigated the relationship between backscattering coefficients of a synthetic aperture radar (SAR) and the four biophysical parameters of rice crops—plant height, green vegetation cover, leaf area index, and total dry biomass. A paddy rice field in Miyazaki, Japan was studied from April to July of 2018, which is the rice cultivation season. The SAR backscattering coefficients were provided by Sentinel-1 satellite. Backscattering coefficients of two polarization settings—VH (vertical transmitting, horizontal receiving) and VV (vertical transmitting, vertical receiving)—were investigated. Plant height, green vegetation cover, leaf area index, and total dry biomass were measured at ground level, on the same dates as satellite image acquisition. Polynomial regression lines indicated relationships between backscattering coefficients and plant biophysical parameters of the rice crop. The biophysical parameters had stronger relationship to VH than to VV polarization. A disadvantage of adopting polynomial regression equations is that the equation can have two biophysical parameter solutions for a particular backscattering coefficient value, which prevents simple conversion from backscattering coefficients to plant biophysical parameters. To overcome this disadvantage, the relationships between backscattering coefficients and the plant biophysical parameters were expressed using a combination of two linear regression lines, one line for the first sub-period and the other for the second sub-period during the entire cultivation period. Following this approach, all four plant biophysical parameters were accurately estimated from the SAR backscattering coefficient, especially with VH polarization, from the date of transplanting to about two months, until the mid-reproductive stage. However, backscattering coefficients saturate after two months from the transplanting, and became insensitive to the further developments in plant biophysical parameters. This research indicates that SAR can effectively and accurately monitor rice crop biophysical parameters, but only up to the mid reproductive stage. Numéro de notice : A2020-223 Thématique : IMAGERIE Nature : Article DOI : 10.3390/rs12010189 date de publication en ligne : 05/01/2020 En ligne : https://doi.org/10.3390/rs12010189 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=94936 [article]

Accurate modelling of canopy traits from seasonal Sentinel-2 imagery based on the vertical distribution of leaf traits / Tawanda W. Gara in ISPRS Journal of photogrammetry and remote sensing, vol 157 (November 2019)  

Public [article]  inISPRS Journal of photogrammetry and remote sensing > vol 157 (November 2019) . - pp 108 - 123 Titre : Accurate modelling of canopy traits from seasonal Sentinel-2 imagery based on the vertical distribution of leaf traits Type de document : Article/Communication Auteurs : Tawanda W. Gara, Auteur ; Roshanak Darvishzadeh, Auteur ; Andrew K. Skidmore, Auteur ; et al., Auteur Année de publication : 2019 Article en page(s) : pp 108 - 123 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes descripteurs IGN] Bavière (Allemagne) [Termes descripteurs IGN] canopée [Termes descripteurs IGN] classification par forêts aléatoires [Termes descripteurs IGN] écosystème forestier [Termes descripteurs IGN] hétérogénéité spatiale [Termes descripteurs IGN] image Sentinel-MSI [Termes descripteurs IGN] indice foliaire [Termes descripteurs IGN] Leaf mass per area [Termes descripteurs IGN] photosynthèse [Termes descripteurs IGN] variation saisonnière Résumé : (Auteur) Leaf traits at canopy level (hereinafter canopy traits) are conventionally expressed as a product of total canopy leaf area index (LAI) and leaf trait content based on samples collected from the exposed upper canopy. This traditional expression is centered on the theory that absorption of incident photosynthetically active radiation (PAR) follow a bell-shaped function skewed to the upper canopy. However, the validity of this theory has remained untested for a suite of canopy traits in a temperate forest ecosystem across multiple seasons using multispectral imagery. In this study, we examined the effect of canopy traits expression in modelling canopy traits using Sentinel-2 multispectral data across the growing season in Bavaria Forest National Park (BFNP), Germany. To achieve this, we measured leaf mass per area (LMA), chlorophyll (Cab), nitrogen (N) and carbon content and LAI from the exposed upper and shaded lower canopy respectively over three seasons (spring, summer and autumn). Subsequently, we estimated canopy traits using two expressions, i.e. the traditional expression-based on the product of LAI and leaf traits content of samples collected from the sunlit upper canopy (hereinafter top-of-canopy expression) and the weighted expression - established on the proportion between the shaded lower and sunlit upper canopy LAI and their respective leaf traits content. Using a Random Forest machine-learning algorithm, we separately modelled canopy traits estimated from the two expressions using Sentinel-2 spectral bands and vegetation indices. Our results showed that dry matter related canopy traits (LMA, N and carbon) estimated based on the weighted canopy expression yield stronger correlations and higher prediction accuracy (NRMSECV  0.48 µg/cm2) across all seasons. We also developed a generalized model that explained 52.57–67.82% variation in canopy traits across the three seasons. Using the most accurate Random Forest model for each season, we demonstrated the capability of Sentinel-2 data to map seasonal dynamics of canopy traits across the park. Results presented in this study revealed that canopy trait expression can have a profound effect on modelling the accuracy of canopy traits using satellite imagery throughout the growing seasons. These findings have implications on model accuracy when monitoring the dynamics of ecosystem functions, processes and services. Numéro de notice : A2019-493 Thématique : FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.isprsjprs.2019.09.005 date de publication en ligne : 11/09/2019 En ligne : https://doi.org/10.1016/j.isprsjprs.2019.09.005 Format de la ressource électronique : URL Article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=93725 [article]

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Estimating leaf area index and aboveground biomass of grazing pastures using Sentinel-1, Sentinel-2 and Landsat images / Jie Wang in ISPRS Journal of photogrammetry and remote sensing, vol 154 (August 2019)  

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Assessment of different vegetation parameters for parameterizing the coupled water cloud model and advanced integral equation model for soil moisture retrieval using time series Sentinel-1A data / Long Wang in Photogrammetric Engineering & Remote Sensing, PERS, vol 85 n° 1 (January 2019)  

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Estimation of winter wheat crop growth parameters using time series Sentinel-1A SAR data / P. Kumar in Geocarto international, vol 33 n° 9 (September 2018)  

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ICARE-VEG: A 3D physics-based atmospheric correction method for tree shadows in urban areas / Karine R.M. Adeline in ISPRS Journal of photogrammetry and remote sensing, vol 142 (August 2018)  

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Extracting leaf area index using viewing geometry effects : A new perspective on high-resolution unmanned aerial system photography / Lukas Roth in ISPRS Journal of photogrammetry and remote sensing, vol 141 (July 2018)  

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