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Early detection of forest stress from European spruce bark beetle attack, and a new vegetation index: Normalized distance red & SWIR (NDRS) / Langning Huo in Remote sensing of environment, Vol 255 (March 2021)  

Public [article]  inRemote sensing of environment > Vol 255 (March 2021) . - n° 112240 Titre : Early detection of forest stress from European spruce bark beetle attack, and a new vegetation index: Normalized distance red & SWIR (NDRS) Type de document : Article/Communication Auteurs : Langning Huo, Auteur ; Henrik J. Persson, Auteur ; Eva Lindberg, Auteur Année de publication : 2021 Article en page(s) : n° 112240 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes descripteurs IGN] bande infrarouge [Termes descripteurs IGN] écho radar [Termes descripteurs IGN] houppier [Termes descripteurs IGN] image Sentinel-MSI [Termes descripteurs IGN] image Sentinel-SAR [Termes descripteurs IGN] indice de stress [Termes descripteurs IGN] indice de végétation [Termes descripteurs IGN] insecte nuisible [Termes descripteurs IGN] maladie parasitaire [Termes descripteurs IGN] Picea mariana [Termes descripteurs IGN] scolyte [Termes descripteurs IGN] signature spectrale [Termes descripteurs IGN] Suède [Termes descripteurs IGN] vulnérabilité Résumé : (auteur) The European spruce bark beetle (Ips typographus [L.]) is one of the most damaging pest insects of European spruce forests. A crucial measure in pest control is the removal of infested trees before the beetles leave the bark, which generally happens before the end of June. However, stressed tree crowns do not show any significant color changes in the visible spectrum at this early-stage of infestation, making early detection difficult. In order to detect the related forest stress at an early stage, we investigated the differences in radar and spectral signals of healthy and stressed trees. How the characteristics of stressed trees changed over time was analyzed for the whole vegetation season, which covered the period before attacks (April), early-stage infestation (‘green-attacks’, May to July), and middle to late-stage infestation (August to October). The results show that spectral differences already existed at the beginning of the vegetation season, before the attacks. The spectral separability between the healthy and infested samples did not change significantly during the ‘green-attack’ stage. The results indicate that the trees were stressed before the attacks and had spectral signatures that differed from healthy ones. These stress-induced spectral changes could be more efficient indicators of early infestations than the ‘green-attack’ symptoms. In this study we used Sentinel-1 and 2 images of a test site in southern Sweden from April to October in 2018 and 2019. The red and SWIR bands from Sentinel-2 showed the highest separability of healthy and stressed samples. The backscatter from Sentinel-1 and additional bands from Sentinel-2 contributed only slightly in the Random Forest classification models. We therefore propose the Normalized Distance Red & SWIR (NDRS) index as a new index based on our observations and the linear relationship between the red and SWIR bands. This index identified stressed forest with accuracies from 0.80 to 0.88 before the attacks, from 0.80 to 0.82 in the early-stage infestation, and from 0.81 to 0.91 in middle- and late-stage infestations. These accuracies are higher than those attained by established vegetation indices aimed at ‘green-attack’ detection, such as the Normalized Difference Water Index, Ratio Drought Index, and Disease Stress Water Index. By using the proposed method, we highlight the potential of using NDRS with Sentinel-2 images to estimate forest vulnerability to European spruce bark beetle attacks early in the vegetation season. Numéro de notice : A2021-190 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article DOI : 10.1016/j.rse.2020.112240 date de publication en ligne : 20/01/2021 En ligne : https://doi.org/10.1016/j.rse.2020.112240 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=97111 [article]

Geo-spatially modelling dengue epidemics in urban cities: a case study of Lahore, Pakistan / Muhammad Imran in Geocarto international, vol 36 n° 2 ([01/02/2021])  

Public [article]  inGeocarto international > vol 36 n° 2 [01/02/2021] . - pp 197 - 211 Titre : Geo-spatially modelling dengue epidemics in urban cities: a case study of Lahore, Pakistan Type de document : Article/Communication Auteurs : Muhammad Imran, Auteur ; Yasra Hamid, Auteur ; Abeer Mazher, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : pp 197 - 211 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Analyse spatiale [Termes descripteurs IGN] cartographie des risques [Termes descripteurs IGN] diptère [Termes descripteurs IGN] image Landsat [Termes descripteurs IGN] maladie tropicale [Termes descripteurs IGN] modélisation spatiale [Termes descripteurs IGN] Normalized Difference Vegetation Index [Termes descripteurs IGN] Pakistan [Termes descripteurs IGN] régression géographiquement pondérée [Termes descripteurs IGN] régression logistique [Termes descripteurs IGN] risque sanitaire [Termes descripteurs IGN] série temporelle [Termes descripteurs IGN] zone intertropicale [Termes descripteurs IGN] zone urbaine Résumé : (auteur) The study objective is to predict the epidemiological impact of dengue fever arbovirosis in urban tropical areas of Pakistan. To do so, we used the GPS-based data of the Aedes larvae collected during 2014–2015 in Lahore. We developed a Geographically Weighted Logistic Regression (GWLR) model for Geospatially predicting larvae presence or absence in Lahore. Data on rainfall, temperature are included along with time series of the normalized difference vegetation index (NDVI) derived from Landsat imagery. We observed a high spatial variability of the GWLR parameter estimates of these variables in the study area. The GWLR model significantly (R2a = 0.78) explained the presence or absence of Aedes larvae with temperature, rainfall and NDVI variables in South and Southeast of the study area. In the North and North-West, however, GWLR relationships were observed weak in highly populated areas. Interpolating GWLR coefficients generate more accurate maps of Aedes larvae presence or absence. Numéro de notice : A2021-118 Affiliation des auteurs : non IGN Thématique : GEOMATIQUE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1080/10106049.2019.1614100 date de publication en ligne : 10/06/2020 En ligne : https://doi.org/10.1080/10106049.2019.1614100 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=96932 [article]

Is Xylella fastidiosa a serious threat to European forests? / Marie-Laure Desprez-Loustau in Forestry, an international journal of forest research, vol 94 n° 1 (January 2021)  

Public [article]  inForestry, an international journal of forest research > vol 94 n° 1 (January 2021) . - pp 1 - 17 Titre : Is Xylella fastidiosa a serious threat to European forests? Type de document : Article/Communication Auteurs : Marie-Laure Desprez-Loustau, Auteur ; Yialmaz Balci, Auteur ; Daniele Cornara, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : pp 1 - 17 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes descripteurs IGN] Acer pseudoplatanus [Termes descripteurs IGN] Amérique du nord [Termes descripteurs IGN] dépérissement [Termes descripteurs IGN] écosystème forestier [Termes descripteurs IGN] Europe (géographie politique) [Termes descripteurs IGN] Italie [Termes descripteurs IGN] maladie bactérienne [Termes descripteurs IGN] Olea europaea [Termes descripteurs IGN] Quercus (genre) [Termes descripteurs IGN] Ulmus (genre) [Termes descripteurs IGN] viticulture [Vedettes matières IGN] Végétation et changement climatique Résumé : (auteur) The recent emergence of Olive Quick Decline Syndrome in Italy, caused by Xylella fastidiosa, has drawn attention to the risks posed by this vector-borne bacterium to important crops in Europe (especially fruit trees and grapevine). Comparatively very little is known on actual and potential impacts of this pathogen in forests, in the native (North American) and introduced (European) regions, respectively. The present review aims to address important questions related to the threat posed by X. fastidiosa to European forests, such as the following: What are the symptoms, hosts and impact of bacterial leaf scorch caused by X. fastidiosa on trees in North America? Which forest tree species have been found infected in the introduction area in Europe? How does X. fastidiosa cause disease in susceptible hosts? Are there any X. fastidiosa genotypes (subspecies and sequence types) specifically associated with forest trees? How is X. fastidiosa transmitted? What are the known and potential vectors for forest trees? How does vector ecology affect disease? Is the distribution of X. fastidiosa, especially the strains associated with trees, restricted by climatic factors? Is disease risk for trees different in forest ecosystems as compared with urban settings? We conclude by pointing to important knowledge gaps related to all these questions and strongly advocate for more research about the Xylella-forest pathosystems, in both North America and Europe. Numéro de notice : A2021-072 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1093/forestry/cpaa029 date de publication en ligne : 06/08/2020 En ligne : https://doi.org/10.1093/forestry/cpaa029 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=96805 [article]

Evaluating the impact of declining tsetse fly (Glossina pallidipes) habitat in the Zambezi valley of Zimbabwe / Farai Matawa in Geocarto international, vol 35 n° 12 ([01/09/2020])  

Public [article]  inGeocarto international > vol 35 n° 12 [01/09/2020] . - pp 1373 - 1384 Titre : Evaluating the impact of declining tsetse fly (Glossina pallidipes) habitat in the Zambezi valley of Zimbabwe Type de document : Article/Communication Auteurs : Farai Matawa, Auteur ; Amon Murwira, Auteur ; Peter M. Atkinson, Auteur Année de publication : 2020 Article en page(s) : pp 1373 - 1384 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Analyse spatiale [Termes descripteurs IGN] biodiversité [Termes descripteurs IGN] bovin [Termes descripteurs IGN] couvert végétal [Termes descripteurs IGN] diptère [Termes descripteurs IGN] distance [Termes descripteurs IGN] distribution spatiale [Termes descripteurs IGN] forêt tropicale [Termes descripteurs IGN] habitat d'espèce [Termes descripteurs IGN] maladie parasitaire [Termes descripteurs IGN] Zambèze (fleuve) [Termes descripteurs IGN] Zimbabwe Résumé : (auteur) Tsetse flies transmit trypanosomes that cause Human African Trypanosomiasis (HAT) in humans and African Animal Trypanosomiasis (AAT) in animals. Understanding historical trends in the spatial distribution of tsetse fly habitat is necessary for planning vector control measures. The objectives of this study were (i) to test for evidence of any trends in suitable tsetse fly habitat and (ii) to test whether there is an association between trypanosomiasis detected from livestock sampled in dip tanks and local tsetse habitat in the project area. Results indicate a significant decreasing trend in the amount of suitable habitat. There is no significant correlation between trypanosomiasis prevalence rates in cattle and distance from patches of suitable tsetse habitat. The observed low trypanosomiasis prevalence and the lack of dependence on suitable tsetse fly habitat can be explained by the observed decreases in suitable tsetse habitat, which themselves are due to expansion of settlement and agriculture in North Western Zimbabwe. Numéro de notice : A2020-486 Affiliation des auteurs : non IGN Thématique : GEOMATIQUE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1080/10106049.2019.1576780 date de publication en ligne : 21/03/2019 En ligne : https://doi.org/10.1080/10106049.2019.1576780 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=95653 [article]

NEAT approach for testing and validation of geospatial network agent-based model processes: case study of influenza spread / Taylor Anderson in International journal of geographical information science IJGIS, vol 34 n° 9 (September 2020)  

Public [article]  inInternational journal of geographical information science IJGIS > vol 34 n° 9 (September 2020) . - pp 1792 - 1821 Titre : NEAT approach for testing and validation of geospatial network agent-based model processes: case study of influenza spread Type de document : Article/Communication Auteurs : Taylor Anderson, Auteur ; Suzana Dragićević, Auteur Année de publication : 2020 Article en page(s) : pp 1792 - 1821 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Analyse spatiale [Termes descripteurs IGN] agent (intelligence artificielle) [Termes descripteurs IGN] épidémie [Termes descripteurs IGN] interaction spatiale [Termes descripteurs IGN] modèle orienté agent [Termes descripteurs IGN] outil d'aide à la décision [Termes descripteurs IGN] réseau intelligent [Termes descripteurs IGN] théorie des graphes [Termes descripteurs IGN] Vancouver (Colombie britannique) Résumé : (auteur) Agent-based models (ABM) are used to represent a variety of complex systems by simulating the local interactions between system components from which observable spatial patterns at the system-level emerge. Thus, the degree to which these interactions are represented correctly must be evaluated. Networks can be used to discretely represent and quantify interactions between system components and the emergent system structure. Therefore, the main objective of this study is to develop and implement a novel validation approach called the NEtworks for ABM Testing (NEAT) that integrates geographic information science, ABM approaches, and spatial network representations to simulate complex systems as measurable and dynamic spatial networks. The simulated spatial network structures are measured using graph theory and compared with empirical regularities of observed real networks. The approach is implemented to validate a theoretical ABM representing the spread of influenza in the City of Vancouver, Canada. Results demonstrate that the NEAT approach can validate whether the internal model processes are represented realistically, thus better enabling the use of ABMs in decision-making processes. Numéro de notice : A2020-478 Affiliation des auteurs : non IGN Thématique : GEOMATIQUE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1080/13658816.2020.1741000 date de publication en ligne : 06/04/2020 En ligne : https://doi.org/10.1080/13658816.2020.1741000 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=95625 [article]

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