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A convolution neural network for forest leaf chlorophyll and carotenoid estimation using hyperspectral reflectance / Shuo Shi in International journal of applied Earth observation and geoinformation, vol 108 (April 2022)  

Public [article]  inInternational journal of applied Earth observation and geoinformation > vol 108 (April 2022) . - n° 102719 Titre : A convolution neural network for forest leaf chlorophyll and carotenoid estimation using hyperspectral reflectance Type de document : Article/Communication Auteurs : Shuo Shi, Auteur ; Lu Xu, Auteur ; Wei Gong, Auteur ; et al., Auteur Année de publication : 2022 Article en page(s) : n° 102719 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Traitement d'image optique [Termes IGN] chlorophylle [Termes IGN] classification par réseau neuronal convolutif [Termes IGN] écosystème forestier [Termes IGN] feuille (végétation) [Termes IGN] modèle de transfert radiatif [Termes IGN] processus gaussien [Termes IGN] réflectance spectrale [Termes IGN] régression Résumé : (auteur) Forest leaf chlorophyll (Cab) and carotenoid (Cxc) are key functional indicators for the state of the forest ecosystem. Current machine learning models based on hyperspectral reflectance are widely applied to estimate leaf Cab and Cxc contents at leaf scale. However, these models have certain accuracy for non-independent datasets but have poor generalization for independent datasets when they are used to estimate leaf Cab and Cxc contents. This fact limits that hyperspectral remote sensing completely replaces destructive measurements for leaf Cab and Cxc contents. Thus, the development of an estimation model with high accuracy and satisfactory generalization is necessary. Convolutional neural networks (CNNs) have certain accuracy and generalization in many domains, and have the potential to solve above-mentioned problem. Therefore, this study developed a CNN using one-dimensional hyperspectral reflectance, which aimed to improve the model's accuracy and generalization in leaf Cab and Cxc content estimation at leaf scale. The proposed CNN was developed by three steps. First, in consideration of the correlation between leaf Cab and Cxc contents in natural leaves, 2500 physical data with leaf reflectance and corresponding Cab and Cxc contents were generated by leaf radiative transfer model and multivariable gaussian distribution function. Then, the proposed CNN was built by five strategies based on the architecture of the AlexNet. Finally, five-fold cross validation was performed with 70% of the physical data to determine the best strategy to develop the proposed CNN. These were executed to ensure the proposed CNN with the maximum accuracy and generalization. In addition, the accuracy and generalization of the proposed CNN were tested using a non-independent dataset and an independent dataset, respectively. The proposed CNN was also compared with back propagation neural network (BPNN), support vector regression (SVR) and gaussian process regression (GPR). Results showed that the best CNN could be developed with one input, five convolutional, three max-pooling and three fully-connected layers. Comprehensively considering the model's accuracy and generalization, the proposed CNN was the best model for leaf Cab and Cxc content estimation compared with BPNN, SVR and GPR. This study provides a development strategy of CNN estimation model using one-dimensional hyperspectral reflectance at leaf scale. The proposed CNN could further promote the practical application of hyperspectral remote sensing in leaf Cab and Cxc content estimation. Numéro de notice : A2022-231 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article DOI : 10.1016/j.jag.2022.102719 Date de publication en ligne : 16/02/2022 En ligne : https://doi.org/10.1016/j.jag.2022.102719 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=100119 [article]

Simultaneous retrieval of selected optical water quality indicators from Landsat-8, Sentinel-2, and Sentinel-3 / Nima Pahlevan in Remote sensing of environment, vol 270 (March 2022)  

Public [article]  inRemote sensing of environment > vol 270 (March 2022) . - n° 112860 Titre : Simultaneous retrieval of selected optical water quality indicators from Landsat-8, Sentinel-2, and Sentinel-3 Type de document : Article/Communication Auteurs : Nima Pahlevan, Auteur ; Brandon Smith, Auteur ; Krista Alikas, Auteur ; et al., Auteur Année de publication : 2022 Article en page(s) : n° 112860 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Traitement d'image optique [Termes IGN] analyse des mélanges spectraux [Termes IGN] appariement d'images [Termes IGN] apprentissage automatique [Termes IGN] chlorophylle [Termes IGN] classification par maximum de vraisemblance [Termes IGN] classification par Perceptron multicouche [Termes IGN] correction atmosphérique [Termes IGN] données multisources [Termes IGN] eaux côtières [Termes IGN] image Landsat-OLI [Termes IGN] image Sentinel-MSI [Termes IGN] image Sentinel-OLCI [Termes IGN] matière organique [Termes IGN] Oregon (Etats-Unis) [Termes IGN] qualité des eaux Résumé : (auteur) Constructing multi-source satellite-derived water quality (WQ) products in inland and nearshore coastal waters from the past, present, and future missions is a long-standing challenge. Despite inherent differences in sensors’ spectral capability, spatial sampling, and radiometric performance, research efforts focused on formulating, implementing, and validating universal WQ algorithms continue to evolve. This research extends a recently developed machine-learning (ML) model, i.e., Mixture Density Networks (MDNs) (Pahlevan et al., 2020; Smith et al., 2021), to the inverse problem of simultaneously retrieving WQ indicators, including chlorophyll-a (Chla), Total Suspended Solids (TSS), and the absorption by Colored Dissolved Organic Matter at 440 nm (acdom(440)), across a wide array of aquatic ecosystems. We use a database of in situ measurements to train and optimize MDN models developed for the relevant spectral measurements (400–800 nm) of the Operational Land Imager (OLI), MultiSpectral Instrument (MSI), and Ocean and Land Color Instrument (OLCI) aboard the Landsat-8, Sentinel-2, and Sentinel-3 missions, respectively. Our two performance assessment approaches, namely hold-out and leave-one-out, suggest significant, albeit varying degrees of improvements with respect to second-best algorithms, depending on the sensor and WQ indicator (e.g., 68%, 75%, 117% improvements based on the hold-out method for Chla, TSS, and acdom(440), respectively from MSI-like spectra). Using these two assessment methods, we provide theoretical upper and lower bounds on model performance when evaluating similar and/or out-of-sample datasets. To evaluate multi-mission product consistency across broad spatial scales, map products are demonstrated for three near-concurrent OLI, MSI, and OLCI acquisitions. Overall, estimated TSS and acdom(440) from these three missions are consistent within the uncertainty of the model, but Chla maps from MSI and OLCI achieve greater accuracy than those from OLI. By applying two different atmospheric correction processors to OLI and MSI images, we also conduct matchup analyses to quantify the sensitivity of the MDN model and best-practice algorithms to uncertainties in reflectance products. Our model is less or equally sensitive to these uncertainties compared to other algorithms. Recognizing their uncertainties, MDN models can be applied as a global algorithm to enable harmonized retrievals of Chla, TSS, and acdom(440) in various aquatic ecosystems from multi-source satellite imagery. Local and/or regional ML models tuned with an apt data distribution (e.g., a subset of our dataset) should nevertheless be expected to outperform our global model. Numéro de notice : A2022-126 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Article DOI : 10.1016/j.rse.2021.112860 Date de publication en ligne : 04/01/2022 En ligne : https://doi.org/10.1016/j.rse.2021.112860 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=99705 [article]

Detection and biomass estimation of phaeocystis globosa blooms off Southern China from UAV-based hyperspectral measurements / Xue Li in IEEE Transactions on geoscience and remote sensing, vol 60 n° 1 (January 2022)  

Public [article]  inIEEE Transactions on geoscience and remote sensing > vol 60 n° 1 (January 2022) . - n° 4200513 Titre : Detection and biomass estimation of phaeocystis globosa blooms off Southern China from UAV-based hyperspectral measurements Type de document : Article/Communication Auteurs : Xue Li, Auteur ; Shaoling Shang, Auteur ; Zhongping Lee, Auteur ; et al., Auteur Année de publication : 2022 Article en page(s) : n° 4200513 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes IGN] algue [Termes IGN] biomasse [Termes IGN] cartographie thématique [Termes IGN] Chine [Termes IGN] chlorophylle [Termes IGN] couleur de l'océan [Termes IGN] espèce exotique envahissante [Termes IGN] image captée par drone [Termes IGN] image hyperspectrale [Termes IGN] plancton [Termes IGN] réflectance Résumé : (auteur) Phaeocystis globosa (P. globosa) is a unique causative species of harmful algal blooms, which can form gelatinous colonies. We, for the first time, used unmanned aerial vehicle (UAV) measurements to identify P. globosa blooms and to quantify the biomass. Based on in situ measured remote sensing reflectance ( Rrs ), it is found that, for P. globosa blooms, the maximum of the second-derivative ( dλ2Rrs ) of Rrs(λ) in the 460–480-nm domain is beyond 466 nm. An analysis of the absorption properties from algal cultures suggested that this feature comes from the absorption of chlorophyll c3 (Chl −/c3 ) around 466 nm, a prominent feature of P. globosa. This position of dλ2Rrs maximum was, thus, selected as the criterion for P. globosa identification. The spatial extent of P. globosa blooms in two bays off southern China was then mapped by applying the criterion to UAV-measured Rrs . Twelve out of 16 UAV and in situ match-up stations were consistently identified as dominated by P. globosa, indicating the accuracy of 75%. Furthermore, using localized empirical models, chlorophyll a (Chl −/a ) concentration and colony numbers of P. globosa were estimated from UAV-derived Rrs , where P. globosa colonies were found in a range of ~3–37 gel matrix/L, indicating the occurrence of weak to moderate P. globosa blooms during the surveys. The promising results suggest a high potential for detection and quantification of P. globosa blooms in near-shore bays or harbors using UAV-based hyperspectral remote sensing, where conventional ocean color satellite remote sensing runs into difficulties. Numéro de notice : A2022-025 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1109/TGRS.2021.3051466 Date de publication en ligne : 26/01/2021 En ligne : https://doi.org/10.1109/TGRS.2021.3051466 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=99254 [article]

A deep learning model using satellite ocean color and hydrodynamic model to estimate chlorophyll-a concentration / Daeyong Jin in Remote sensing, vol 13 n°10 (May-2 2021)  

Public [article]  inRemote sensing > vol 13 n°10 (May-2 2021) . - n° 2003 Titre : A deep learning model using satellite ocean color and hydrodynamic model to estimate chlorophyll-a concentration Type de document : Article/Communication Auteurs : Daeyong Jin, Auteur ; Eojin Lee, Auteur ; Kyonghwan Kwon, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : n° 2003 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes IGN] apprentissage profond [Termes IGN] chlorophylle [Termes IGN] classification par réseau neuronal convolutif [Termes IGN] Corée du sud [Termes IGN] distribution spatiale [Termes IGN] données d'entrainement (apprentissage automatique) [Termes IGN] hydrodynamique [Termes IGN] image COMS-GOCI Résumé : (auteur) In this study, we used convolutional neural networks (CNNs)—which are well-known deep learning models suitable for image data processing—to estimate the temporal and spatial distribution of chlorophyll-a in a bay. The training data required the construction of a deep learning model acquired from the satellite ocean color and hydrodynamic model. Chlorophyll-a, total suspended sediment (TSS), visibility, and colored dissolved organic matter (CDOM) were extracted from the satellite ocean color data, and water level, currents, temperature, and salinity were generated from the hydrodynamic model. We developed CNN Model I—which estimates the concentration of chlorophyll-a using a 48 × 27 sized overall image—and CNN Model II—which uses a 7 × 7 segmented image. Because the CNN Model II conducts estimation using only data around the points of interest, the quantity of training data is more than 300 times larger than that of CNN Model I. Consequently, it was possible to extract and analyze the inherent patterns in the training data, improving the predictive ability of the deep learning model. The average root mean square error (RMSE), calculated by applying CNN Model II, was 0.191, and when the prediction was good, the coefficient of determination (R2) exceeded 0.91. Finally, we performed a sensitivity analysis, which revealed that CDOM is the most influential variable in estimating the spatiotemporal distribution of chlorophyll-a. Numéro de notice : A2021-417 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Article DOI : 10.3390/rs13102003 Date de publication en ligne : 20/05/2021 En ligne : https://doi.org/10.3390/rs13102003 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=97759 [article]

Inversion of solar-induced chlorophyll fluorescence using polarization measurements of vegetation / Haiyan Yao in Photogrammetric Engineering & Remote Sensing, PERS, vol 87 n° 5 (May 2021)  

Public [article]  inPhotogrammetric Engineering & Remote Sensing, PERS > vol 87 n° 5 (May 2021) . - pp 331-338 Titre : Inversion of solar-induced chlorophyll fluorescence using polarization measurements of vegetation Type de document : Article/Communication Auteurs : Haiyan Yao, Auteur ; Ziying Li, Auteur ; Yang Han, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : pp 331-338 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection [Termes IGN] chlorophylle [Termes IGN] couvert végétal [Termes IGN] données polarimétriques [Termes IGN] fluorescence [Termes IGN] polarisation Résumé : (Auteur) In vegetation remote sensing, the apparent radiation of the vegetation canopy is often combined with three components derived from different parts of vegetation that have different production mechanisms and optical properties: volume scattering Lvol, polarized light Lpol, and chlorophyll fluorescence ChlF. The chlorophyll fluorescence plays a very important role in vegetation remote sensing, and the polarization information in vegetation remote sensing has become an effective way to characterize the physical characteristics of vegetation. This study analyzes the difference between these three types of radiation flux and utilizes polarization radiation to separate them from the apparent radiation of the vegetation canopy. Specifically, solar-induced chlorophyll fluorescence is extracted from vegetation canopy radiation data using standard Fraunhofer-line discrimination. The results show that polarization measurements can quantitatively separate Lvol, Lpol, and ChlF and extract the solar-induced chlorophyll fluorescence. This study improves our understanding of the light-scattering properties of vegetation canopies and provides insights for developing building models and research algorithms. Numéro de notice : A2021-365 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.14358/PERS.87.5.331 Date de publication en ligne : 01/05/2021 En ligne : https://doi.org/10.14358/PERS.87.5.331 Format de la ressource électronique : URL Article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=97694 [article]

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