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Multi-task fully convolutional network for tree species mapping in dense forests using small training hyperspectral data / Laura Elena Cué La Rosa in ISPRS Journal of photogrammetry and remote sensing, vol 179 (September 2021)  

Public [article]  inISPRS Journal of photogrammetry and remote sensing > vol 179 (September 2021) . - pp 35 - 49 Titre : Multi-task fully convolutional network for tree species mapping in dense forests using small training hyperspectral data Type de document : Article/Communication Auteurs : Laura Elena Cué La Rosa, Auteur ; Camile Sothe, Auteur ; Raul Queiroz Feitosa, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : pp 35 - 49 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Traitement d'image optique [Termes IGN] Brésil [Termes IGN] carte de la végétation [Termes IGN] classification par réseau neuronal convolutif [Termes IGN] classification par séparateurs à vaste marge [Termes IGN] densité de la végétation [Termes IGN] données d'apprentissage [Termes IGN] espèce végétale [Termes IGN] étiquetage sémantique [Termes IGN] forêt tropicale [Termes IGN] image captée par drone [Termes IGN] image hyperspectrale Résumé : (Auteur) This work proposes a multi-task fully convolutional architecture for tree species mapping in dense forests from sparse and scarce polygon-level annotations using hyperspectral UAV-borne data. Our model implements a partial loss function that enables dense tree semantic labeling outcomes from non-dense training samples, and a distance regression complementary task that enforces tree crown boundary constraints and substantially improves the model performance. Our multi-task architecture uses a shared backbone network that learns common representations for both tasks and two task-specific decoders, one for the semantic segmentation output and one for the distance map regression. We report that introducing the complementary task boosts the semantic segmentation performance compared to the single-task counterpart in up to 11% reaching an average user’s accuracy of 88.63% and an average producer’s accuracy of 88.59%, achieving state-of-art performance for tree species classification in tropical forests. Numéro de notice : A2021-575 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.isprsjprs.2021.07.001 Date de publication en ligne : 28/07/2021 En ligne : https://doi.org/10.1016/j.isprsjprs.2021.07.001 Format de la ressource électronique : URL Article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=98175 [article]

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Picea abies and Pseudotsuga menziesii radial growth in relation to climate: case study from South Bohemia / Jan Mondek in Austrian journal of forest science, vol 2021 n° 3 (2021)  

Public [article]  inAustrian journal of forest science > vol 2021 n° 3 (2021) Titre : Picea abies and Pseudotsuga menziesii radial growth in relation to climate: case study from South Bohemia Type de document : Article/Communication Auteurs : Jan Mondek, Auteur ; Karel Matějka, Auteur ; et al., Auteur Année de publication : 2021 Langues : Anglais (eng) Descripteur : [Termes IGN] Bohème [Termes IGN] cerne [Termes IGN] changement climatique [Termes IGN] croissance des arbres [Termes IGN] espèce végétale [Termes IGN] Picea abies [Termes IGN] Pseudotsuga menziesii [Termes IGN] République Tchèque [Termes IGN] sécheresse [Termes IGN] stress hydrique [Vedettes matières IGN] Végétation et changement climatique Numéro de notice : A2021-784 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article DOI : sans En ligne : https://www.forestscience.at/artikel/2021/03/picea-abies-and-pseudotsuga-menzies [...] Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=98957 [article]

Classification of tree species in a heterogeneous urban environment using object-based ensemble analysis and World View-2 satellite imagery / Simbarashe Jombo in Applied geomatics, vol 13 n° 3 (September 2021)  

Public [article]  inApplied geomatics > vol 13 n° 3 (September 2021) . - pp 373 - 387 Titre : Classification of tree species in a heterogeneous urban environment using object-based ensemble analysis and World View-2 satellite imagery Type de document : Article/Communication Auteurs : Simbarashe Jombo, Auteur ; Elhadi Adam, Auteur ; John Odindi, Auteur Année de publication : 2021 Article en page(s) : pp 373 - 387 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Traitement d'image optique [Termes IGN] analyse d'image orientée objet [Termes IGN] arbre urbain [Termes IGN] classification par forêts aléatoires [Termes IGN] classification par séparateurs à vaste marge [Termes IGN] espèce végétale [Termes IGN] image à très haute résolution [Termes IGN] image multibande [Termes IGN] image Worldview [Termes IGN] indice de végétation [Termes IGN] Johannesbourg [Termes IGN] segmentation d'image Résumé : (auteur) Urban trees are valuable in, inter alia, ameliorating air pollution and mitigating the effects associated with urban heat islands. The dearth of tree cover maps is a major challenge for urban planners in the management of urban trees. This work adopts remote sensing approaches to provide urban tree cover maps which can strengthen urban landscape management. Whereas traditional pixel-based classification approaches have been commonly used in image classification, they are not well-suited for urban tree mapping due to their failure to fully explore the image’s spatial and spectral characteristics. Object-based classification techniques produce improved accuracies using additional variables. This study depicts the capability of object-based image analysis (OBIA) in mapping common urban trees using very high-resolution (VHR) WorldView-2 (WV-2) imagery. The study tests the utility of WV-2 bands and other feature variables in the object-based mapping of common urban trees and other land cover classes. Furthermore, the study compares the utility of Support Vector Machine (SVM) and Random Forest (RF) in the object-based mapping of common urban trees and other land cover classes. The results show that the Normalized Difference Vegetation Index (NDVI), NIR 1 and NIR 2 bands were important in the classification of common urban trees and other land cover classes. The RF classifier performed better than SVM, with an overall accuracy of 91.9% as compared to 87.3% for SVM. The results of this study offer insight to urban authorities with knowledge on the segmentation parameters, classification methods and feature variables for mapping urban trees, valuable in urban tree management. Numéro de notice : A2021-624 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article DOI : 10.1007/s12518-021-00358-3 Date de publication en ligne : 20/01/2021 En ligne : https://doi.org/10.1007/s12518-021-00358-3 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=98248 [article]

Direct analysis in real-time (DART) time-of-flight mass spectrometry (TOFMS) of wood reveals distinct chemical signatures of two species of Afzelia / Peter Kitin in Annals of Forest Science [en ligne], vol 78 n° 2 (June 2021)  

Public [article]  inAnnals of Forest Science [en ligne] > vol 78 n° 2 (June 2021) . - Article 31 Titre : Direct analysis in real-time (DART) time-of-flight mass spectrometry (TOFMS) of wood reveals distinct chemical signatures of two species of Afzelia Type de document : Article/Communication Auteurs : Peter Kitin, Auteur ; Edgard Espinoza, Auteur ; Hans Beeckman, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : Article 31 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Traitement d'image [Termes IGN] abattage (sylviculture) [Termes IGN] Afzelia (genre) [Termes IGN] analyse discriminante [Termes IGN] apprentissage non-dirigé [Termes IGN] bois [Termes IGN] espèce végétale [Termes IGN] forêt tropicale [Termes IGN] identification de plantes [Termes IGN] signature spectrale [Termes IGN] spectrométrie [Termes IGN] taxinomie [Termes IGN] temps réel Résumé : (Auteur) Distinct chemical fingerprints of the wood of Afzelia pachyloba and A. bipindensis demonstrated an effective method for identifying these two commercially important species. Direct analysis in real-time (DART) time-of-flight mass spectrometry (TOFMS) allowed high-throughput examination of chemotypes with vast potential in taxonomic, ecological, and forensic research of wood. Context : Afzelia is a genus of valuable tropical timber trees. Accurate identification of wood is required for the prevention of illicit timber trade as well as for certification purposes in the forest and wood products industry. For many years, particular interest has been focused on attempts to distinguish the wood of A. bipindensis Harms from A. pachyloba Harms due to substantial differences in the commercial values of these two species. Aims : We investigated if wood chemical signatures and microscopy could identify the wood of A. bipindensis and A. pachyloba. Methods : We used two approaches, namely metabolome profiling by direct analysis in real-time (DART) time-of-flight mass spectrometry (TOFMS) and wood microstructure by light microscopy and SEM. In all, we analyzed samples from 89 trees of A. bipindensis, and A. pachyloba. Results : The two species could not be separated by the IAWA standard microscopic wood features. SEM analysis showed considerable variation in the morphology of vestured pits; however, this variation was not species-specific. In contrast, DART-TOFMS followed by unsupervised statistics (Discriminant Analysis of Principal Components) showed distinct metabolome signatures of the two species. Conclusion : DART-TOFMS provides a rapid method for wood identification that can be easily applied to small heartwood samples. Time- and cost-effective classification of wood chemotypes by DART-TOFMS can have potential applications in various research questions in forestry, wood science, tree-ecophysiology, and forensics. Numéro de notice : A2021-327 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1007/s13595-020-01024-1 Date de publication en ligne : 31/03/2021 En ligne : https://doi.org/10.1007/s13595-020-01024-1 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=97488 [article]

Provisioning forest and conservation science with high-resolution maps of potential distribution of major European tree species under climate change / Debojyoti Chakraborty in Annals of Forest Science [en ligne], vol 78 n° 2 (June 2021)  

Public [article]  inAnnals of Forest Science [en ligne] > vol 78 n° 2 (June 2021) . - Article 26 Titre : Provisioning forest and conservation science with high-resolution maps of potential distribution of major European tree species under climate change Type de document : Article/Communication Auteurs : Debojyoti Chakraborty, Auteur ; Norbert Móricz, Auteur ; Ervin Rasztovits, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : Article 26 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] analyse de groupement [Termes IGN] carte forestière [Termes IGN] changement climatique [Termes IGN] conservation des ressources forestières [Termes IGN] espèce végétale [Termes IGN] Europe (géographie politique) [Termes IGN] Fagus sylvatica [Termes IGN] Larix decidua [Termes IGN] outil d'aide à la décision [Termes IGN] peuplement forestier [Termes IGN] Picea abies [Termes IGN] Pinus sylvestris [Termes IGN] Quercus pedunculata [Termes IGN] Quercus sessiliflora [Termes IGN] vulnérabilité [Vedettes matières IGN] Ecologie forestière Résumé : (Auteur) We developed a dataset of the potential distribution of seven ecologically and economically important tree species of Europe in terms of their climatic suitability with an ensemble approach while accounting for uncertainty due to model algorithms. The dataset was documented following the ODMAP protocol to ensure reproducibility. Our maps are input data in a decision support tool “SusSelect” which predicts the vulnerability of forest trees in climate change and recommends adapted planting material. Numéro de notice : A2021-329 Affiliation des auteurs : non IGN Thématique : BIODIVERSITE/FORET Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1007/s13595-021-01029-4 Date de publication en ligne : 22/03/2021 En ligne : https://doi.org/10.1007/s13595-021-01029-4 Format de la ressource électronique : URL Article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=97490 [article]

Shedding light on typical species: implications for habitat monitoring / Gianmaria Bonari in Plant sociology, vol 58 n° 1 ([01/02/2021])  

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CNN-based tree species classification using high resolution RGB image data from automated UAV observations / Sebastian Egli in Remote sensing, vol 12 n° 23 (December-2 2020)  

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Bioclimatic modeling of potential vegetation types as an alternative to species distribution models for projecting plant species shifts under changing climates / Robert E. Keane in Forest ecology and management, vol 477 ([01/12/2020])  

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Mapping forest tree species in high resolution UAV-based RGB-imagery by means of convolutional neural networks / Felix Schiefer in ISPRS Journal of photogrammetry and remote sensing, vol 170 (December 2020)  

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See the forest and the trees: Effective machine and deep learning algorithms for wood filtering and tree species classification from terrestrial laser scanning / Zhouxin Xi in ISPRS Journal of photogrammetry and remote sensing, vol 168 (October 2020)  

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Tree species classification using structural features derived from terrestrial laser scanning / Louise Terryn in ISPRS Journal of photogrammetry and remote sensing, vol 168 (October 2020)  

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Detection of Xylella fastidiosa infection symptoms with airborne multispectral and thermal imagery: Assessing bandset reduction performance from hyperspectral analysis / T. Poblete in ISPRS Journal of photogrammetry and remote sensing, vol 162 (April 2020)  

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Fusion of 3D point clouds and hyperspectral data for the extraction of geometric and radiometric features of trees / Eduardo Alejandro Tusa Jumbo (2020)  

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Mapping of forest tree distribution and estimation of forest biodiversity using Sentinel-2 imagery in the University Research Forest Taxiarchis in Chalkidiki, Greece / Maria Kampouri in Geocarto international, vol 34 n° 12 ([15/09/2019])  

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Partition idéalisée et régionalisée de la composition en espèces ligneuses des forêts françaises / Jean-Daniel Bontemps in Ecoscience, vol 26 n° 4 (2019)  

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