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Towards a semi-automated mapping of Australia native invasive alien Acacia trees using Sentinel-2 and radiative transfer models in South Africa / Cecilia Masemola in ISPRS Journal of photogrammetry and remote sensing, vol 166 (August 2020)
[article]
Titre : Towards a semi-automated mapping of Australia native invasive alien Acacia trees using Sentinel-2 and radiative transfer models in South Africa Type de document : Article/Communication Auteurs : Cecilia Masemola, Auteur ; Moses Azong Cho, Auteur ; Abel Ramoelo, Auteur Année de publication : 2020 Article en page(s) : pp 153 - 168 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection
[Termes IGN] Acacia (genre)
[Termes IGN] Afrique du sud (état)
[Termes IGN] canopée
[Termes IGN] cartographie automatique
[Termes IGN] chlorophylle
[Termes IGN] distribution du coefficient de réflexion bidirectionnelle BRDF
[Termes IGN] échantillonnage
[Termes IGN] espèce exotique envahissante
[Termes IGN] essence indigène
[Termes IGN] image Sentinel-MSI
[Termes IGN] Leaf Area Index
[Termes IGN] modèle de transfert radiatif
[Termes IGN] réflectance
[Termes IGN] surveillance de la végétationRésumé : (auteur) Invasive alien plants (IAPs) threaten biodiversity and critical ecosystem services worldwide. There is, therefore, an urgent need to develop intervention measures to control the spread of IAPs. Efforts to control and monitor the spread of IAPs would require their current and detailed distribution over a large geographic area. Recently launched multispectral instrument on-board Sentinel-2 provides free data with good spatiotemporal and spectral resolution, compared to Landsat datasets. The Sentinel-2 dataset, therefore, can be a useful source of the IAPs spatial information required for detection and monitoring purposes. We combined Sentinel-2 data with a radiative transfer model to discriminate IAPs (Acacia mearnsii and Acacia dealbata) from surrounding native tree species in Van Reenen, KwaZulu-Natal, South Africa. The forward mode of combined PROSPECT leaf optical properties model and SAIL canopy bidirectional reflectance model, also referred to as PROSAIL was used to simulate reflectance corresponding to bands of Sentinel-MSI, while the PROSAIL model inversion retrieved leaf area index (LAI) and canopy chlorophyll contents (CCC) of the IAPs and native species. Both reflectance and retrieved properties were used to map the distribution of the species within the study area. Our results showed that A. mearnsii and A. dealbata could be accurately discriminated from the surrounding native trees using integrated PROSAIL Sentinel-2 based model. We found that CCC– and LAI-based (% accuracy = 92.8%, 91.4% for CCC and LAI, respectively) modelling produced a higher classification accuracy than field sampling-based modelling (Accuracy = 90.2% (IAP), 82.2% (NAT) and kappa coefficient = 0.84 (IAP), 0.78 (NAT)). Simulated bands corresponding to Sentinel-2 data, on the other hand, produced species maps comparable to field sampling-based maps. Overall, the integrated PROSAIL Sentinel-2 inversion approach proved suitable for detecting and mapping IAPs over a large area. Due to the high spatiotemporal coverage of Sentinel-2, satellite images, the model developed showed the potential to contribute to the IAPs monitoring systems. Numéro de notice : A2020-352 Affiliation des auteurs : non IGN Thématique : BIODIVERSITE/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.isprsjprs.2020.04.009 Date de publication en ligne : 13/06/2020 En ligne : https://doi.org/10.1016/j.isprsjprs.2020.04.009 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=95235
in ISPRS Journal of photogrammetry and remote sensing > vol 166 (August 2020) . - pp 153 - 168[article]Réservation
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[article]
Titre : Detection of Xylella fastidiosa infection symptoms with airborne multispectral and thermal imagery: Assessing bandset reduction performance from hyperspectral analysis Type de document : Article/Communication Auteurs : T. Poblete, Auteur ; C. Camino, Auteur ; P.S.A. Beck, Auteur Année de publication : 2020 Article en page(s) : pp 27 - 40 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection
[Termes IGN] chlorophylle
[Termes IGN] classification par séparateurs à vaste marge
[Termes IGN] espèce végétale
[Termes IGN] fluorescence
[Termes IGN] image hyperspectrale
[Termes IGN] image multibande
[Termes IGN] image satellite
[Termes IGN] image thermique
[Termes IGN] Italie
[Termes IGN] maladie bactérienne
[Termes IGN] maladie phytosanitaire
[Termes IGN] Olea europaea
[Termes IGN] stress hydrique
[Termes IGN] surveillance de la végétation
[Termes IGN] télédétection aérienne
[Termes IGN] traitement d'imageRésumé : (auteur) Xylella fastidiosa (Xf) is a harmful plant pathogenic bacterium, able to infect over 500 plant species worldwide. Successful eradication and containment strategies for harmful pathogens require large-scale monitoring techniques for the detection of infected hosts, even when they do not display visual symptoms. Although a previous study using airborne hyperspectral and thermal imagery has shown promising results for the early detection of Xf-infected olive (Olea europaea) trees, further work is needed when adopting these techniques for large scale monitoring using multispectral cameras on board airborne platforms and satellites. We used hyperspectral and thermal imagery collected during a two-year airborne campaign in a Xf-infected area in southern Italy to assess the performance of spectrally constrained machine-learning algorithms for this task. The algorithms were used to assess multispectral bandsets, selected from the original hyperspectral imagery, that were compatible with large-scale monitoring from unmanned platforms and manned aircraft. In addition, the contribution of solar–induced chlorophyll fluorescence (SIF) and the temperature-based Crop Water Stress Index (CWSI) retrieved from hyperspectral and thermal imaging, respectively, were evaluated to quantify their relative importance in the algorithms used to detect Xf infection. The detection performance using support vector machine algorithms decreased from ∼80% (kappa, κ = 0.42) when using the original full hyperspectral dataset including SIF and CWSI to ∼74% (κ = 0.36) when the optimal set of six spectral bands most sensitive to Xf infection were used in addition to the CWSI thermal indicator. When neither SIF nor CWSI were used, the detection yielded less than 70% accuracy (decreasing κ to very low performance, 0.29), revealing that tree temperature was more important than chlorophyll fluorescence for the Xf detection. This work demonstrates that large-scale Xf monitoring can be supported using airborne platforms carrying multispectral and thermal cameras with a limited number of spectral bands (e.g., six to 12 bands with 10 nm bandwidths) as long as they are carefully selected by their sensitivity to the Xf symptoms. More precisely, the blue (bands between 400 and 450 nm to derive the NPQI index) and thermal (to derive CWSI from tree temperature) were the most critical spectral regions for their sensitivity to Xf symptoms in olive. Numéro de notice : A2020-120 Affiliation des auteurs : non IGN Thématique : IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.isprsjprs.2020.02.010 Date de publication en ligne : 18/02/2020 En ligne : https://doi.org/10.1016/j.isprsjprs.2020.02.010 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=94745
in ISPRS Journal of photogrammetry and remote sensing > vol 162 (April 2020) . - pp 27 - 40[article]Flowering acceleration in native Brazilian tree species for genetic conservation and breeding / Gleidson Guilherme Caldas Mende in Annals of forest research, Vol 63 n° 1 (January - June 2020)
[article]
Titre : Flowering acceleration in native Brazilian tree species for genetic conservation and breeding Type de document : Article/Communication Auteurs : Gleidson Guilherme Caldas Mende, Auteur ; Gleison Augusto dos Santos, Auteur ; Marcos Deon Vilela de Resende, Auteur ; et al., Auteur Année de publication : 2020 Article en page(s) : pp 39 - 52 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] analyse de variance
[Termes IGN] arbre (flore)
[Termes IGN] Brésil
[Termes IGN] croissance des arbres
[Termes IGN] essence indigène
[Termes IGN] génétique forestière
[Termes IGN] verger à graines
[Vedettes matières IGN] BotaniqueRésumé : (auteur) Grafting and growth retardants are commonly used in breeding programs to stimulate flower production. However, little is known about their effects on Brazilian tree species. The aim of this study was to investigate the vegetative and reproductive development of grafted tree seedlings treated with paclobutrazol (PBZ) and grown under greenhouse or outdoor conditions. Potted seedlings of Jacaranda mimosifolia, Handroanthus heptaphyllus, Swietenia macrophylla, Schinus terebinthifolius, Cariniana legalis, and Hymenaea courbaril were evaluated. Shoot number, length, and circumference as well as flower and fruit numbers were determined at 50 and 90 days after PBZ application. Data were subjected to analysis of variance, and means were compared by Tukey’s test (P ≤ 0.05). Growing conditions influenced the vegetative parameters of seedlings, especially after 90 days. J. mimosifolia and S. terebinthifolius responded positively to flowering induction, and their fruit and flower numbers differed between growing environments. Potted grafts of the six native tree species were successfully grown. Grafting and PBZ application induced early flowering in J. mimosifolia and S. terebinthifolius. Numéro de notice : A2020-515 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article nature-HAL : ArtAvecCL-RevueNat DOI : 10.15287/afr.2019.1751 Date de publication en ligne : 16/03/2020 En ligne : https://doi.org/10.15287/afr.2019.1751 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=95674
in Annals of forest research > Vol 63 n° 1 (January - June 2020) . - pp 39 - 52[article]Fusion of 3D point clouds and hyperspectral data for the extraction of geometric and radiometric features of trees / Eduardo Alejandro Tusa Jumbo (2020)
Titre : Fusion of 3D point clouds and hyperspectral data for the extraction of geometric and radiometric features of trees Type de document : Thèse/HDR Auteurs : Eduardo Alejandro Tusa Jumbo, Auteur ; Jocelyn Chanussot, Directeur de thèse ; Jean-Matthieu Monnet, Encadrant ; Mauro Dalla Mura, Encadrant ; Jean-Baptiste Barré, Encadrant Editeur : Grenoble : Université de Grenoble Année de publication : 2020 Importance : 153 p. Format : 21 x 30 cm Note générale : Bibliographie
Thèse pour obtenir le grade de docteur de l'Université Grenoble Alpes, Signal image parole TelecomsLangues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications photogrammétriques
[Termes IGN] Alpes (France)
[Termes IGN] données lidar
[Termes IGN] données localisées 3D
[Termes IGN] espèce végétale
[Termes IGN] extraction de la végétation
[Termes IGN] forêt alpestre
[Termes IGN] fusion de données multisource
[Termes IGN] image hyperspectrale
[Termes IGN] inventaire forestier (techniques et méthodes)
[Termes IGN] inventaire forestier local
[Termes IGN] semis de points
[Termes IGN] télédétection par lidar
[Termes IGN] télédétection spatialeIndex. décimale : THESE Thèses et HDR Résumé : (Auteur) Mountain forests provide environmental ecosystem services (EES) to communities: supplying of recreational landscapes, protection against natural hazards, supporting biodiversity conservation, among others. The preservation of these EES through space and time requires a good characterization of the resources. Especially in mountains, stands are very heterogeneous and timber harvesting is economically possible thanks to trees of higher value. This is why we want to be able to map each tree and estimate its characteristics, including quality, which is related to its shape and growth conditions. Field inventories are not able to provide a wall to wall cover of detailed tree-level information on a large scale. On the other hand, remote sensing tools seem to be a promising technology because of the time efficient and the affordable costs for studying forest areas. LiDAR data provide detailed information from the vertical distribution and location of the trees, but it is limited for mapping species. Hyperspectral data are associated to absorption features in the canopy reflectance spectrum, but is not effective for characterizing tree geometry. Hyperspectral and LiDAR systems provide independent and complementary data that are relevant for the assessment of biophysical and biochemical attributes of forest areas. This PhD thesis deals with the fusion of LiDAR and hyperspectral data to characterize individual forest trees. The leading idea is to improve methods to derive forest information at tree-level by extracting geometric and radiometric features. The contributions of this research work relies on: i) an updated review of data fusion methods of LiDAR and hyperspectral data for forest monitoring, ii) an improved 3D segmentation algorithm for delineating individual tree crowns based on Adaptive Mean Shift (AMS3D) and an ellipsoid crown shape model, iii) a criterion for feature selection based on random forests score, 5-fold cross validation and a cumulative error function for forest tree species classification. The two main methods used to derive forest information at tree level are tested with remote sensing data acquired in the French Alps. Note de contenu : 1 Introduction
1.1 Forest
1.2 Principles of remote sensing
1.3 Motivation
1.4 Objectives
1.5 Thesis structure
2. Data Fusion 15
2.1 Principles of fusion
2.2 Low-level
2.3 Medium-level
2.4 High-level
2.5 Applications
3. Material 32
3.1 Field data
3.2 Study areas
3.3 ALS and hyperspectral data
4 ITC Delineation
4.1 Introduction
4.2 MS segmentation
4.3 AMS3D based on crown shape model
4.4 Experimental analysis
4.5 Conclusion
5. Tree Species Classification
5.1 Introduction
5.2 Study area
5.3 Methodology
5.4 Results and discussion
5.5 Conclusions
6. Conclusion and work perspectives
6.1 How data processing methods are applied in each level of data fusion for forest monitoring?
6.2 How a crown shape model can improve the segmentation of individual tree crowns?
6.3 Which feature combination contribute to characterize the forest tree species composition?Numéro de notice : 26582 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Thèse française Note de thèse : Thèse de Doctorat : Signal image parole Telecoms : Grenoble : 2020 Organisme de stage : Grenoble Images Parole Signal Automatique GIPSA-lab nature-HAL : Thèse DOI : sans Date de publication en ligne : 30/07/2021 En ligne : https://tel.archives-ouvertes.fr/tel-03212453/document Format de la ressource électronique : URL Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=98403 Mapping of forest tree distribution and estimation of forest biodiversity using Sentinel-2 imagery in the University Research Forest Taxiarchis in Chalkidiki, Greece / Maria Kampouri in Geocarto international, vol 34 n° 12 ([15/09/2019])
[article]
Titre : Mapping of forest tree distribution and estimation of forest biodiversity using Sentinel-2 imagery in the University Research Forest Taxiarchis in Chalkidiki, Greece Type de document : Article/Communication Auteurs : Maria Kampouri, Auteur ; Polychronis Kolokoussis, Auteur ; Demetre Argialas, Auteur ; Vassilia Karathanassi, Auteur Année de publication : 2019 Article en page(s) : pp 1273 - 1285 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection
[Termes IGN] analyse d'image orientée objet
[Termes IGN] biomasse forestière
[Termes IGN] conservation des ressources forestières
[Termes IGN] écosystème forestier
[Termes IGN] espèce végétale
[Termes IGN] Grèce
[Termes IGN] image multibande
[Termes IGN] image multitemporelle
[Termes IGN] image Sentinel-MSI
[Termes IGN] indicateur de biodiversité
[Termes IGN] indice de diversité
[Termes IGN] modèle numérique de surface
[Termes IGN] réalité de terrain
[Termes IGN] segmentation d'imageRésumé : (Auteur) The aim of this study is to investigate the potential of Sentinel-2 imagery for the identification and determination of forest patches of particular interest, with respect to ecosystem integrity and biodiversity and to produce a relevant biodiversity map, based on Simpson’s diversity index in Taxiarchis university research forest, Chalkidiki, North Greece. The research is based on OBIA being developed on to bi-temporal summer and winter Sentinel-2 imagery. Fuzzy rules, which are based on topographic factors, such as terrain elevation and slope for the distribution of each tree species, derived from expert knowledge and field observations, were used to improve the accuracy of tree species classification. Finally, Simpson’s diversity index for forest tree species, was calculated and mapped, constituting a relative indicator for biodiversity for forest ecosystem organisms (fungi, insects, birds, reptiles, mammals) and carrying implications for the identification of patches prone to disturbance or that should be prioritized for conservation. Numéro de notice : A2019-465 Affiliation des auteurs : non IGN Thématique : BIODIVERSITE/FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1080/10106049.2018.1489424 Date de publication en ligne : 12/09/2018 En ligne : https://doi.org/10.1080/10106049.2018.1489424 Format de la ressource électronique : URL Article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=93616
in Geocarto international > vol 34 n° 12 [15/09/2019] . - pp 1273 - 1285[article]Partition idéalisée et régionalisée de la composition en espèces ligneuses des forêts françaises / Jean-Daniel Bontemps in Ecoscience, vol 26 n° 4 (2019)PermalinkBackground mortality drivers of European tree species: climate change matters / Adrien Taccoen in Proceedings of the Royal society B : Biological sciences, Vol 286 n° 1900 (April 2019)PermalinkModeling tree-growth : Assessing climate suitability of temperate forests growing in Moncayo Natural Park (Spain) / Edurne Martínez del Castillo in Forest ecology and management, vol 435 (1 March 2019)PermalinkTree species classification in tropical forests using visible to shortwave infrared WorldView-3 images and texture analysis / Matheus Pinheiro Ferreira in ISPRS Journal of photogrammetry and remote sensing, vol 149 (March 2019)PermalinkSpecies mixing effects on forest productivity : A case study at stand-, species- and tree-level in the Netherlands / Huicui Lu in Forests, vol 9 n° 11 (November 2018)PermalinkConnecting infrared spectra with plant traits to identify species / Maria F. Buitrago in ISPRS Journal of photogrammetry and remote sensing, vol 139 (May 2018)PermalinkEstimating stand density, biomass and tree species from very high resolution stereo-imagery – towards an all-in-one sensor for forestry applications? / Fabian E. Fassnacht in Forestry, an international journal of forest research, vol 90 n° 5 (December 2017)PermalinkRemote sensing of species diversity using Landsat 8 spectral variables / Sabelo Madonsela in ISPRS Journal of photogrammetry and remote sensing, vol 133 (November 2017)PermalinkTree species classification using within crown localization of waveform LiDAR attributes / Rosmarie Blomley in ISPRS Journal of photogrammetry and remote sensing, vol 133 (November 2017)PermalinkNorthern conifer forest species classification using multispectral data acquired from an unmanned aerial vehicle / Steven E. Franklin in Photogrammetric Engineering & Remote Sensing, PERS, vol 83 n° 7 (July 2017)PermalinkSemantic segmentation of forest stands of pure species combining airborne lidar data and very high resolution multispectral imagery / Clément Dechesne in ISPRS Journal of photogrammetry and remote sensing, vol 126 (April 2017)PermalinkClimatic microrefugia under anthropogenic climate change: implications for species redistribution / Jonathan Lenoir in Ecography, vol 40 n° 2 (February 2017)PermalinkSegmentation sémantique de données de télédétection multimodale : application aux peuplements forestiers / Clément Dechesne (2017)PermalinkInfluence of tree species complexity on discrimination performance of vegetation indices / Azadeh Ghiyamat in European journal of remote sensing, vol 49 n° 1 (2016)PermalinkEstimating forest species abundance through linear unmixing of CHRIS/PROBA imagery / S. Stagakis in ISPRS Journal of photogrammetry and remote sensing, vol 119 (September 2016)PermalinkRetrieval of leaf area index in different plant species using thermal hyperspectral data / Elnaz Neinavaz in ISPRS Journal of photogrammetry and remote sensing, vol 119 (September 2016)PermalinkWithin-stem maps of wood density and water content for characterization of species: a case study on three hardwood and two softwood species / Fleur Longuetaud in Annals of Forest Science, vol 73 n° 3 (September 2016)PermalinkOptimizing the spatial resolution of WorldView-2 imagery for discriminating forest vegetation at subspecies level in KwaZulu-Natal, South Africa / Romano Lottering in Geocarto international, vol 31 n° 7 - 8 (July - August 2016)PermalinkResidual vegetation patches within natural boreal wild fires: Characterizing by pattern metrics, land cover expec tations and proximity to firebreak features / Yikalo H. Araya in Geomatica, vol 69 n° 4 (December 2015)PermalinkInvestigating the robustness of the new Landsat-8 Operational Land Imager derived texture metrics in estimating plantation forest aboveground biomass in resource constrained areas / Timothy Dube in ISPRS Journal of photogrammetry and remote sensing, vol 108 (October 2015)Permalink