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Comparison of three algorithms to estimate tree stem diameter from terrestrial laser scanner data / Joris Ravaglia in Forests, vol 10 n° 7 (July 2019)
[article]
Titre : Comparison of three algorithms to estimate tree stem diameter from terrestrial laser scanner data Type de document : Article/Communication Auteurs : Joris Ravaglia, Auteur ; Richard A. Fournier, Auteur ; Alexandra Bac, Auteur ; Cédric Vega , Auteur ; Jean-François Côté, Auteur ; Alexandre Piboule, Auteur ; Ulysse Rémillard, Auteur Année de publication : 2019 Projets : ARBRE / AgroParisTech (2007 -) Article en page(s) : 19 p. Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Lasergrammétrie
[Termes IGN] analyse comparative
[Termes IGN] Canada
[Termes IGN] diamètre à hauteur de poitrine
[Termes IGN] diamètre des arbres
[Termes IGN] données lidar
[Termes IGN] données localisées 3D
[Termes IGN] feuillu
[Termes IGN] France (administrative)
[Termes IGN] inventaire forestier (techniques et méthodes)
[Termes IGN] Pinophyta
[Termes IGN] semis de points
[Termes IGN] transformation de Hough
[Termes IGN] volume en boisRésumé : (auteur) Terrestrial laser scanners provide accurate and detailed point clouds of forest plots, which can be used as an alternative to destructive measurements during forest inventories. Various specialized algorithms have been developed to provide automatic and objective estimates of forest attributes from point clouds. The STEP (Snakes for Tuboid Extraction from Point cloud) algorithm was developed to estimate both stem diameter at breast height and stem diameters along the bole length. Here, we evaluate the accuracy of this algorithm and compare its performance with two other state-of-the-art algorithms that were designed for the same purpose (i.e., the CompuTree and SimpleTree algorithms). We tested each algorithm against point clouds that incorporated various degrees of noise and occlusion. We applied these algorithms to three contrasting test sites: (1) simulated scenes of coniferous stands in Newfoundland (Canada), (2) test sites of deciduous stands in Phalsbourg (France), and (3) coniferous plantations in Quebec, Canada. In most cases, the STEP algorithm predicted diameter at breast height with higher R2 and lower RMSE than the other two algorithms. The STEP algorithm also achieved greater accuracy when estimating stem diameter in occluded and noisy point clouds, with mean errors in the range of 1.1 cm to 2.28 cm. The CompuTree and SimpleTree algorithms respectively produced errors in the range of 2.62 cm to 6.1 cm and 1.03 cm to 3.34 cm, respectively. Unlike CompuTree or SimpleTree, the STEP algorithm was not able to estimate trunk diameter in the uppermost portions of the trees. Our results show that the STEP algorithm is more adapted to extract DBH and stem diameter automatically from occluded and noisy point clouds. Our study also highlights that SimpleTree and CompuTree require data filtering and results corrections. Conversely, none of these procedures were applied for the implementation of the STEP algorithm. Numéro de notice : A2019-337 Affiliation des auteurs : LIF+Ext (2012-2019) Autre URL associée : vers HAL Thématique : FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.3390/f10070599 Date de publication en ligne : 18/07/2019 En ligne : https://hal.science/hal-03325416v1 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=93367
in Forests > vol 10 n° 7 (July 2019) . - 19 p.[article]Using LiDAR-modified topographic wetness index, terrain attributes with leaf area index to improve a single-tree growth model in south-eastern Finland / Cheikh Mohamedou in Forestry, an international journal of forest research, vol 92 n° 3 (July 2019)
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Titre : Using LiDAR-modified topographic wetness index, terrain attributes with leaf area index to improve a single-tree growth model in south-eastern Finland Type de document : Article/Communication Auteurs : Cheikh Mohamedou, Auteur ; Lauri Korhonen, Auteur ; Kalle Eerikäinen, Auteur ; Timo Tokola, Auteur Année de publication : 2019 Article en page(s) : pp 253 - 263 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Lasergrammétrie
[Termes IGN] croissance des arbres
[Termes IGN] diamètre des arbres
[Termes IGN] données lidar
[Termes IGN] données localisées 3D
[Termes IGN] erreur systématique
[Termes IGN] Finlande
[Termes IGN] humidité du sol
[Termes IGN] indice d'humidité
[Termes IGN] Leaf Area Index
[Termes IGN] modèle de croissance végétale
[Termes IGN] Perceptron multicoucheRésumé : (Auteur) Tree growth information is crucial in forest management and planning. Terrain-derived attributes such as the topographic wetness index (TWI), in addition to leaf area index (LAI) are closely related to tree growth, but are not commonly used in empirical growth models. In this study, we examined if modified TWI and LAI estimated from airborne light detection and ranging (LiDAR) data could be used to improve the predictions of a national single-tree diameter growth model. Altogether 1118 sample trees were selected within 197 subjectively placed plots in randomly selected forest stands in south-eastern Finland. Linear mixed effect (LME) and multilayer perceptron models were used to model the bias of 5-year growth predictions of the model and thus ultimately improve its predictions. The root mean square error (RMSE) of the national model was 0.604 cm. LME modelling reduced this value to 0.404 cm and MLP to 0.568 cm. The predictors included in the best-performing LME model were modified TWI, LAI estimated from LiDAR intensities, and elevation. Without an LAI estimate, the best RMSE was 0.436 cm. When applied as such, original and modified TWIs produced similar accuracy. We conclude that both TWI and LAI obtained from LiDAR data improve the diameter growth predictions of the national model. Numéro de notice : A2019-293 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1093/forestry/cpz010 Date de publication en ligne : 28/02/2019 En ligne : https://doi.org/10.1093/forestry/cpz010 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=93184
in Forestry, an international journal of forest research > vol 92 n° 3 (July 2019) . - pp 253 - 263[article]A general method for the classification of forest stands using species composition and vertical and horizontal structure / Miquel De Cáceres in Annals of Forest Science, vol 76 n° 2 (June 2019)
[article]
Titre : A general method for the classification of forest stands using species composition and vertical and horizontal structure Type de document : Article/Communication Auteurs : Miquel De Cáceres, Auteur ; Santiago Martín-Alcón, Auteur ; José Ramon Gonzalez-Olabarria, Auteur ; Lluis Coll, Auteur Année de publication : 2019 Note générale : Bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] analyse bivariée
[Termes IGN] analyse univariée
[Termes IGN] Catalogne (Espagne)
[Termes IGN] composition floristique
[Termes IGN] diamètre des arbres
[Termes IGN] hauteur des arbres
[Termes IGN] inventaire forestier (techniques et méthodes)
[Termes IGN] inventaire forestier étranger (données)
[Termes IGN] peuplement forestier
[Termes IGN] similitude
[Termes IGN] structure d'un peuplement forestier
[Termes IGN] typologie forestière
[Vedettes matières IGN] Inventaire forestierRésumé : (Auteur) Context : Forest typologies are useful for many purposes, including forest mapping, assessing habitat quality, studying forest dynamics, or defining sustainable management strategies. Quantitative typologies meant for forestry applications normally focus on horizontal and vertical structure of forest plots as main classification criteria, with species composition often playing a secondary role. The selection of relevant variables is often idiosyncratic and influenced by a priori expectations of the forest types to be distinguished.
Aims : We present a general framework to define forest typologies where the dissimilarity between forest stands is assessed using coefficients that integrate the information of species composition with the univariate distribution of tree diameters or heights or the bivariate distribution of tree diameters and heights.
Methods : We illustrate our proposal with the classification of forest inventory plots in Catalonia (NE Spain), comparing the results obtained using the bivariate distribution of diameters and heights to those obtained using either tree heights or tree diameters only.
Results : The number of subtypes obtained using the tree diameter distribution for the calculation of dissimilarity was often the same as those obtained from the tree height distribution or to those using the bivariate distribution. However, classifications obtained using the three approaches were often different in terms of forest plot membership.
Conclusion : The proposed classification framework is particularly suited to define forest typologies from forest inventory data and allows taking advantage of the bivariate distribution of diameters and heights if both variables are measured. It can provide support to the development of typologies in situations where fine-scale variability of topographic, climatic, and legacy management factors leads to fine-scale variation in forest structure and composition, including uneven-aged and mixed stands.Numéro de notice : A2019-183 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1007/s13595-019-0824-0 Date de publication en ligne : 12/04/2019 En ligne : https://doi.org/10.1007/s13595-019-0824-0 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=92704
in Annals of Forest Science > vol 76 n° 2 (June 2019)[article]Estimating architecture-based metabolic scaling exponents of tropical trees using terrestrial LiDAR and 3D modelling / Alvaro Lau in Forest ecology and management, vol 439 (1 May 2019)
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Titre : Estimating architecture-based metabolic scaling exponents of tropical trees using terrestrial LiDAR and 3D modelling Type de document : Article/Communication Auteurs : Alvaro Lau, Auteur ; Christopher Martius, Auteur ; Harm Bartholomeus, Auteur ; et al., Auteur Année de publication : 2019 Article en page(s) : pp 132-145 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Lasergrammétrie
[Termes IGN] allométrie
[Termes IGN] bois sur pied
[Termes IGN] branche (arbre)
[Termes IGN] diamètre des arbres
[Termes IGN] données lidar
[Termes IGN] forêt tropicale
[Termes IGN] Guyana
[Termes IGN] mise à l'échelle
[Termes IGN] modélisation 3D
[Termes IGN] semis de points
[Termes IGN] structure d'un peuplement forestier
[Termes IGN] télémétrie laser terrestreRésumé : (auteur) The geometric structure of tree branches has been hypothesized to relate to the mechanical safety and efficiency of resource transport within a tree. As such, the topology of tree architecture links physical properties within a tree and influences the interaction of the tree with its environment. Prior work suggests the existence of general principles which govern tree architectural patterns across of species and bio-geographical regions. In particular, West, Brown and Enquist (WBE, 1997) and Savage et al. (2010) derive scaling exponents (branch radius scaling ratio and branch length scaling ratio ) from symmetrical branch parameters and from these, an architecture-based metabolic scaling rate () for the whole tree. With this key scaling exponent, the metabolism (e.g., number of leaves, respiration, etc.) of a whole tree, or potentially a group of trees, can be estimated allometrically. Until now, branch parameter values have been measured manually; either from standing live trees or from harvested trees. Such measurements are time consuming, labour intensive and susceptible to subjective errors. Remote sensing, and specifically terrestrial LiDAR (TLS), is a promising alternative, being objective, scalable, and able to collect large quantities of data without destructive sampling. In this paper, we calculated branch length, branch radius, and architecture-based metabolic rate scaling exponents by first using TLS to scan standing trees and then fitting quantitative structure models (TreeQSM) models to 3D point clouds from nine trees in a tropical forest in Guyana. To validate these TLS-derived scaling exponents, we compared them with exponents calculated from direct field measurements of all branches >10 cm at four scales: branch-level, cumulative branch order, tree-level and plot-level. We found a bias on the estimations of and exponents due to a bias on the reconstruction of the branching architecture. Although TreeQSM scaling exponents predicted similar as the manually measured exponents, this was due to the combination of and scaling exponents which were both biased. Also, the manually measured and scaling exponents diverged from the WBE’s theoretical exponents suggesting that trees in tropical environments might not follow the predictions for the symmetrical branching geometry proposed by WBE. Our study provides an alternative method to estimate scaling exponents at both the branch- and tree-level in tropical forest trees without the need for destructive sampling. Although this approach is based on a limited sample of nine trees in Guyana, it can be implemented for large-scale plant scaling assessments. These new data might improve our current understanding of metabolic scaling without harvesting trees. Numéro de notice : A2019-485 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.foreco.2019.02.019 Date de publication en ligne : 07/03/2019 En ligne : https://doi.org/10.1016/j.foreco.2019.02.019 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=93664
in Forest ecology and management > vol 439 (1 May 2019) . - pp 132-145[article]Wood quality of black spruce and balsam fir trees defoliated by spruce budworm: A case study in the boreal forest of Quebec, Canada / Carlos Paixao in Forest ecology and management, vol 437 (1 April 2019)
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Titre : Wood quality of black spruce and balsam fir trees defoliated by spruce budworm: A case study in the boreal forest of Quebec, Canada Type de document : Article/Communication Auteurs : Carlos Paixao, Auteur ; Cornelia Krause, Auteur ; Hubert Morin, Auteur ; Alexis Achim, Auteur Année de publication : 2019 Article en page(s) : pp 201-210 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] Abies balsamea
[Termes IGN] biomasse forestière
[Termes IGN] bois sur pied
[Termes IGN] croissance des arbres
[Termes IGN] défoliation
[Termes IGN] densité du bois
[Termes IGN] diamètre des arbres
[Termes IGN] données dendrométriques
[Termes IGN] forêt boréale
[Termes IGN] insecte nuisible
[Termes IGN] Picea mariana
[Termes IGN] qualité du bois
[Termes IGN] Québec (Canada)
[Termes IGN] télédétection aérienneRésumé : (auteur) Spruce budworm (SBW – Choristoneura fumiferana Clem.) is one of the most damaging defoliating insects in the coniferous forests of eastern North America. In Canada, the widely distributed balsam fir (Abies balsamea L. (Mill)) and black spruce (Picea mariana B.S.P. (Mill)) are its most important hosts. Defoliation by SBW reduces growth in the host trees and can lead to host mortality. Although SBW impacts on growth are well documented, much less is known about changes in wood properties resulting from defoliation. To address this knowledge gap, we sampled 36 SBW-infested stands located in the boreal forest of Quebec (Canada) to determine whether defoliation modifies the wood quality of affected trees. The selected stands had been subjected to one to four years of SBW defoliation. For both species, we assessed ring growth, wood density, and the anatomical characteristics of stem wood formed during the outbreak years. We determined that rings formed during the SBW outbreak had a significant and progressive loss of biomass production with a longer duration of defoliation. SBW significantly reduced latewood density in the second and third year of defoliation for black spruce and the third and fourth year for balsam fir. Average ring density was reduced only in black spruce and only after four years of defoliation. The observed changes in growth and density were associated with changes in anatomical features. While the cellular characteristics of the earlywood remained fairly constant, significant reductions occurred in latewood cell-wall thickness after three years of defoliation. Our study shows that not only do SBW outbreaks reduce annual radial growth, but the cellular characteristics in latewood cells are also modified momentarily. Thus, SBW outbreaks affect wood density and quality in both black spruce and balsam fir. Numéro de notice : A2019-484 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.foreco.2019.01.032 Date de publication en ligne : 01/02/2019 En ligne : https://doi.org/10.1016/j.foreco.2019.01.032 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=93661
in Forest ecology and management > vol 437 (1 April 2019) . - pp 201-210[article]Evidence of climate effects on the height-diameter relationships of tree species / Mathieu Fortin in Annals of Forest Science, vol 76 n° 1 (March 2019)PermalinkHeight-diameter allometry for tree species in Tanzania mainland / Wilson Ancelm Mugasha in International journal of forestry research, vol 2019 ([01/03/2019])PermalinkPatterns of tree diameter distributions in managed and unmanaged Abies alba Mill. and Fagus sylvatica L. forest patches / Rafał Podlaski in Forest ecology and management, vol 435 (1 March 2019)PermalinkSingle-image photogrammetry for deriving tree architectural traits in mature forest stands: a comparison with terrestrial laser scanning / Kamil Kędra in Annals of Forest Science, vol 76 n° 1 (March 2019)PermalinkUsing LiDAR to develop high-resolution reference models of forest structure and spatial pattern / Haley L. Wiggins in Forest ecology and management, vol 434 (28 February 2019)PermalinkHow do tree mortality models from combined tree-ring and inventory data affect projections of forest succession? / Marco Vanoni in Forest ecology and management, vol 433 (15 February 2019)PermalinkEffect of microsite quality and species composition on tree growth: A semi-empirical modeling approach / Carolina Mayoral in Forest ecology and management, vol 432 (15 January 2019)PermalinkTesting the generality of below-ground biomass allometry across plant functional types / Keryn I. Paul in Forest ecology and management, vol 432 (15 January 2019)PermalinkMeasuring stem diameters with TLS in boreal forests by complementary fitting procedure / Timo P Pitkänen in ISPRS Journal of photogrammetry and remote sensing, vol 147 (January 2019)PermalinkRéévaluation de la ressource et de la disponibilité en bois d’oeuvre des essences feuillues et conifères en France / Philippe Monchaux (2019)Permalink