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Drought in the forest breaks plant–fungi interactions / Andrzej Boczoń in European Journal of Forest Research, vol 140 n° 6 (December 2021)
Titre : Drought in the forest breaks plant–fungi interactions Type de document : Article/Communication Auteurs : Andrzej Boczoń, Auteur ; Dorota Hilszczańska, Auteur ; Marta Wrzosek, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : pp 1301 - 1321 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] champignon mycorhizien
[Termes IGN] dépérissement
[Termes IGN] écosystème forestier
[Termes IGN] endophyte
[Termes IGN] Europe centrale
[Termes IGN] relations plante - sol
[Termes IGN] sécheresse
[Termes IGN] stress hydrique
[Termes IGN] teneur en eau de la végétation
[Vedettes matières IGN] Végétation et changement climatiqueRésumé : (auteur) Drought in the forest is not only a prolonged state of water shortage, but also an occasion where interactions between plants and fungi are affected. Water efficiency accelerates a range of pathologies in interactions between organisms, influencing the ecosystems and their interacting biological components. This study focuses on the role of mycorrhizal and endophyte fungi in alleviating the effects of soil water shortage, and on the impact of their altered activity during drought on the health of trees. The issues presented here show the fundamental role of the mycorrhizal mycelium and the mechanism of water transport to the plant in the course of other phenomena (withering, pathogenesis, endophytes biology) that occur in trees under influence of drought, with particular attention on managed coniferous stands. Conclusions resulting from published information on this topic emphasize the negative impact of soil moisture deficiency on the ectomycorrhizal fungi functioning and, in contrast, on the promotion of the growth of some endophytes, pathogens and hemi-parasitic mistletoes (Viscum spp.). Numéro de notice : A2021-836 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article DOI : 10.1007/s10342-021-01409-5 Date de publication en ligne : 04/09/2021 En ligne : https://doi.org/10.1007/s10342-021-01409-5 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=99016
in European Journal of Forest Research > vol 140 n° 6 (December 2021) . - pp 1301 - 1321[article]
Titre : Early detection of spruce vitality loss with hyperspectral data: Results of an experimental study in Bavaria, Germany Type de document : Article/Communication Auteurs : Kathrin Einzmann, Auteur ; Clement Atzberger, Auteur ; Nicole Pinnel, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : n° 112676 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection
[Termes IGN] Bavière (Allemagne)
[Termes IGN] changement climatique
[Termes IGN] classification par forêts d'arbres décisionnels
[Termes IGN] dépérissement
[Termes IGN] détection de changement
[Termes IGN] houppier
[Termes IGN] image hyperspectrale
[Termes IGN] indice de végétation
[Termes IGN] insecte nuisible
[Termes IGN] phénomène climatique extrême
[Termes IGN] Picea abies
[Termes IGN] réflectance spectrale
[Termes IGN] série temporelle
[Termes IGN] stress hydriqueRésumé : (auteur) Vitality loss of trees caused by extreme weather conditions, drought stress or insect infestations, are expected to increase with ongoing climate change. The detection of vitality loss at an early stage is thus of vital importance for forestry and forest management to minimize ecological and economical damage. Remote sensing instruments are able to detect changes over large areas down to the level of individual trees. The scope of our study is to investigate whether it is possible to detect stress-related spectral changes at an early stage using hyperspectral sensors. For this purpose, two Norway spruce (Picea abies) forest stands, both different in age and maintenance, were monitored in the field over two vegetation periods. In parallel, time series of airborne hyperspectral remote sensing data were acquired. For each stand 70 trees were artificially stressed (ring-barked) and 70 trees were used as control trees. The data collected in south-eastern Germany consists of measurements at multiple times and at different scales: (1) crown conditions were visually assessed in the field (2) needle reflectance spectra were acquired in the laboratory using a FieldSpec spectrometer, and (3) hyperspectral airborne data (HySpex) were flown at 0.5 m spatial resolution. We aimed for a simultaneous data acquisition at the three levels. This unique data set was investigated whether any feature can be discriminated to detect vitality loss in trees at an early stage. Several spectral transformations were applied to the needle and tree crown spectra, such as spectral derivatives, vegetation indices and angle indices. All features were examined for their separability (ring-barked vs. control trees) with the Random Forest (RF) classification algorithm. As result, the younger, well maintained forest stand only showed minor changes over the 2-year period, whereas changes in the older forest stand were observable both in the needle and in the hyperspectral tree crown spectra, respectively. These changes could even be detected before changes were visible by field observations. The tree spectral reactions to ring-barking were first noticeable 11 months after ring-barking and 6 weeks before they were visible by field inspection. The most discriminative features for separating the two groups were the reflectance spectra and the spectral derivatives, over the VIs or angle indices. The tree crown spectra of the two groups could be separated by the RF classifier with a 79% overall accuracy at the beginning of the second vegetation period and 1 month later with 92% overall accuracy with high kappa index. The results clearly demonstrate the great potential of hyperspectral remote sensing in detecting early vitality changes of stressed trees. Numéro de notice : A2021-921 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article DOI : 10.1016/j.rse.2021.112676 Date de publication en ligne : 21/09/2021 En ligne : https://doi.org/10.1016/j.rse.2021.112676 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=99274
in Remote sensing of environment > vol 266 (December 2021) . - n° 112676[article]
Titre : Early detection of pine wilt disease using deep learning algorithms and UAV-based multispectral imagery Type de document : Article/Communication Auteurs : Run Yu, Auteur ; Youqing Luo, Auteur ; Quan Zhou, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : n° 119493 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection
[Termes IGN] apprentissage profond
[Termes IGN] Chine
[Termes IGN] classification par réseau neuronal convolutif
[Termes IGN] dépérissement
[Termes IGN] image captée par drone
[Termes IGN] image multibande
[Termes IGN] maladie phytosanitaire
[Termes IGN] milieu tropical
[Termes IGN] peuplement mélangé
[Termes IGN] Pinus (genre)
[Termes IGN] Pinus massoniana
[Termes IGN] réflectance spectrale
[Termes IGN] Ulmus (genre)Résumé : (auteur) Pine wilt disease (PWD) is a global devastating threat to forest ecosystems. Therefore, a feasible and effective approach to precisely monitor PWD infection is indispensable, especially at the early stages. However, a precise definition of “early stage” and a rapid and high-efficiency method to detect PWD infection have not been well established. In this study, we systematically divided the PWD infection into green, early, middle, and late stages based on the needle color, the resin secretion, and whether the pine wood nematode (PWN) was carried. Simultaneously, an unmanned aerial vehicle (UAV) equipped with multispectral cameras was used to obtain images. Two target detection algorithms (Faster R-CNN and YOLOv4) and two traditional machine learning algorithms based on feature extraction (random forest and support vector machine) were employed to realize the recognition of infected pine trees. Moreover, we took into consideration of the influence of green broad-leaved trees on the identification of pine trees at the early stage of PWD infection. We obtained the following results: (1) the accuracy of Faster R-CNN (60.98–66.7%) was higher than that of YOLOv4 (57.07–63.55%), but YOLOv4 outperformed in terms of model size, processing speed, training time, and testing time; (2) although the traditional machine learning models had higher accuracy (73.28–79.64%), they were not able to directly identify the object from the images; (3) the accuracy of early detection of PWD infection showed an increase of 3.72–4.29%, from 42.36–44.59% to 46.08–48.88%, when broad-leaved trees were considered. In this study, the combination of UAV-based multispectral images and target detection algorithms allowed us to monitor the occurrence of PWD and obtain the distribution of infected trees at an early stage, which can provide technical support for the prevention and control of PWD. Numéro de notice : A2021-658 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1016/j.foreco.2021.119493 En ligne : https://doi.org/10.1016/j.foreco.2021.119493 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=98395
in Forest ecology and management > vol 497 (October-1 2021) . - n° 119493[article]
Titre : Self-thinning tree mortality models that account for vertical stand structure, species mixing and climate Type de document : Article/Communication Auteurs : David I. Forrester, Auteur ; Thomas G. Backer, Auteur ; Stephen R. Elms, Auteur ; et al., Auteur Année de publication : 2021 Article en page(s) : n° 118936 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] Abies alba
[Termes IGN] Australie
[Termes IGN] auto-éclaircie
[Termes IGN] changement climatique
[Termes IGN] Chine
[Termes IGN] dépérissement
[Termes IGN] Eucalyptus nitens
[Termes IGN] Fagus sylvatica
[Termes IGN] modèle de croissance végétale
[Termes IGN] mortalité
[Termes IGN] peuplement forestier
[Termes IGN] peuplement mélangé
[Termes IGN] Picea abies
[Termes IGN] Pinus sylvestris
[Termes IGN] Quercus pedunculata
[Termes IGN] Quercus sessiliflora
[Termes IGN] structure de la végétation
[Termes IGN] Suisse
[Vedettes matières IGN] SylvicultureRésumé : (auteur) Self-thinning dynamics are often considered when managing stand density in forests and are used to constrain forest growth models. However, self-thinning relationships are often quantified using only data at a conceptualised self-thinning line, even though self-thinning can begin before the stand actually reaches a self-thinning line. Also, few self-thinning relationships account for the effects of species composition in mixed-species forests, and stand structure such as relative height of species (in mixtures), and/or size or age cohorts in uneven-aged forests. Such considerations may be important given the effects of global climate change and interest in mixed-species and uneven-aged forests. The objective of this study was to develop self-thinning relationships based on changes in the tree density relative to mean tree diameter, instead of focusing only on data for state variables (e.g. tree density) at the self-thinning line. This was done while also considering how the change in tree density is influenced by site quality and stand structure (species composition and relative height). The relationships were modelled using data from temperate Australian Eucalyptus plantations (436 plots), subtropical forests in China (88 plots), and temperate forests in Switzerland (1055 plots). Zero-inflated and hurdle generalized linear models with Poisson and negative binomial distributions were fit for several species, as well as for all-species equations. The intercepts and slopes of the self-thinning lines were higher than many published studies which may have resulted from both the less restrictive equation form and data selection. The rates of self-thinning often decreased as the proportion of the object species increased, as relative height increased (species or size cohort became more dominant), and as site (quality) index increased. The effects of aridity varied between species, with self-thinning increasing with aridity index for Abies alba, Pinus sylvestris, Quercus petraea and Quercus robur, but decreasing with aridity index for Eucalyptus nitens, Fagus sylvatica and Picea abies as sites became wetter and cooler. Self-thinning model parameters were not correlated with species traits, including specific leaf area, wood basic density or crown diameter – stem diameter allometry. All-species self-thinning relationships based on all data could be adjusted using a correction factor for rarer species where there were insufficient data to develop species-specific equations. The approach and equations developed could be used in forest growth models to calculate how the tree density declines as mean tree size increases, as height changes relative to other cohorts or species, as species proportions change, and as climatic and edaphic conditions change. Numéro de notice : A2021-355 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article DOI : 10.1016/j.foreco.2021.118936 Date de publication en ligne : 18/02/2021 En ligne : https://doi.org/10.1016/j.foreco.2021.118936 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=97612
in Forest ecology and management > Vol 487 [01/05/2021] . - n° 118936[article]
Titre : Modeling size-density trajectories of even-aged ash (Fraxinus excelsior L.) stands in France. A baseline to assess the impact of Chalara ash dieback Type de document : Article/Communication Auteurs : Noël Le Goff, Auteur ; François Ningre, Auteur ; Jean-Marc Ottorini, Auteur Année de publication : 2021 Article en page(s) : n° 3 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] densité de la végétation
[Termes IGN] dépérissement
[Termes IGN] éclaircie (sylviculture)
[Termes IGN] foresterie
[Termes IGN] France (administrative)
[Termes IGN] Fraxinus excelsior
[Termes IGN] Fungi
[Termes IGN] maladie phytosanitaire
[Termes IGN] modèle de croissance végétale
[Termes IGN] mortalité
[Vedettes matières IGN] SylvicultureRésumé : (auteur) Key message: A piecewise polynomial function already used to represent the size-density trajectories of pure even-aged stands of beech, oak, and Douglas-fir proved its ability to represent the size-density trajectories of a new species, ash. The widespread ash dieback caused departures from the expected size-density trajectories. These abnormalities can be used to detect an extra level of mortality due to infection by Hymenoscyphus fraxineus in pure even-aged ash stands.
Context: The size-density trajectories allow quantifying more precisely the density of stands and can help the forest manager to decide of the opportunity of thinnings. This study helped to quantify extra mortality in pure even-aged stands by using the size-density trajectories established for stands evolving at maximum density.
Aims: This study was conducted to establish size-density trajectories of pure even-aged ash stands and compare them with those recently established for beech and oak in France, in particular concerning the onset of density-dependent (regular) mortality. The additional effect of ash dieback on mortality was also an issue.
Material and methods: We used permanent and semi-permanent unthinned ash plots installed in the north of France and where inventories of trees were performed at more or less regular intervals: measurements included tree status (dead or alive) and diameter or girth at breast height for all trees and total height for a sample of living trees. The size-density trajectories of plots describing the course of the number of living trees in relation with the mean stand girth, in logarithmic scales, were modeled with a piecewise polynomial function fitted with a mixed-effects model. A permanent sample of trees was also selected for ash dieback and extra mortality monitoring.
Results: The piecewise polynomial function already used proved its ability to represent the size-density trajectories of even-aged ash stands of various initial densities and fertility levels. As for beech and oak, the trajectories were modeled so that mortality onset occurred at a constant relative density. This level appeared to be much higher for ash (RDI = 0.58), revealing that ash survived with less growing space than beech and oak and appeared to be more efficient. Ash dieback caused an additional mortality in the experimental ash stands studied, and this excess of mortality appeared predictable on the basis of observed departures from the expected size-density trajectories.
Conclusion: A single parameter function family could be used to predict the size-density trajectories of even-aged ash stands, on the basis of the results obtained previously on oak and beech. Mortality onset and space requirements of ash could be compared with those of beech and oak and show that ash can survive at higher densities and is a more efficient species. Predicted size-density trajectories proved also useful to detect and quantify the excess of mortality due to H. fraxineus on ash. This approach could be extended to other diseases and species with predictable size-density trajectories.Numéro de notice : A2021-475 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1007/s13595-020-01005-4 Date de publication en ligne : 07/01/2021 En ligne : https://doi.org/10.1007/s13595-020-01005-4 Format de la ressource électronique : url article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=97095
in Annals of Forest Science > vol 78 n° 1 (March 2021) . - n° 3[article]
