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An open science and open data approach for the statistically robust estimation of forest disturbance areas / Saverio Francini in International journal of applied Earth observation and geoinformation, vol 106 (February 2022)
[article]
Titre : An open science and open data approach for the statistically robust estimation of forest disturbance areas Type de document : Article/Communication Auteurs : Saverio Francini, Auteur ; Ronald E. McRoberts, Auteur ; Giovanni d' Amico, Auteur ; et al., Auteur Année de publication : 2022 Article en page(s) : n° 102663 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Applications de télédétection
[Termes IGN] changement climatique
[Termes IGN] coupe rase (sylviculture)
[Termes IGN] détection de changement
[Termes IGN] estimation statistique
[Termes IGN] Fagus sylvatica
[Termes IGN] Google Earth Engine
[Termes IGN] image Sentinel-MSI
[Termes IGN] Italie
[Termes IGN] méthode robuste
[Termes IGN] perturbation écologique
[Termes IGN] Quercus cerris
[Termes IGN] Quercus pedunculata
[Termes IGN] Quercus pubescens
[Termes IGN] Quercus sessiliflora
[Termes IGN] surveillance forestièreRésumé : (auteur) Forest disturbance monitoring is critical for understanding forest-related greenhouse gas emissions and for determining the role of forest management in mitigating climate change. Multiple algorithms for the automated mapping of forest disturbance using remotely sensed imagery have been developed and applied; however, variability in natural and anthropogenic disturbance phenomena, as well as image acquisition conditions, can result in maps that may be incomplete or that contain inaccuracies that prevent their use for directly estimating areas of disturbance. To reduce errors in reporting disturbance areas, stratified estimators can be applied to obtain statistically robust area estimates, while simultaneously circumventing the need to conduct a complete census or in situations where such a census may not be possible. We present a semi-automated procedure for implementation in Google Earth Engine, 3I3D-GEE, for regional to global mapping of forest disturbance (including clear-cut harvesting, fire, and wind damage) and sample-based estimation of related areas using data from the processing capacity of Google Earth Engine. Documentation for the application is also provided in Appendix A. Using Sentinel-2 (S2) imagery, our procedure was applied and tested for 2018 in Italy for which the approximately 11 million ha of forests (mostly Q. pubescens, Q. robur, Q. cerris, Q. petraea, and Fagus sylvatica) serve as an appropriate case study because national statistics on forest disturbance areas are not available. To decrease the overall standard errors of the area estimates, the sampling intensities in areas where greater variability in the form of greater commission and omission errors are expected can be increased. To this end, we augmented the predicted forest disturbance map with a buffer class consisting of a two-pixel buffer (20 m) on each side of the disturbance class boundary. We selected a reference sample of 19,300 points: a simple random sample of 9,300 points from the buffer and simple random samples of 5000 from each of the undisturbed and disturbed classes. The reference sample was photointerpreted using fine resolution orthophotos (30 cm) and S2 imagery. While the estimate of the disturbed area obtained by adding the areas of pixels classified as disturbed was 41,732 ha, the estimate obtained using the unbiased stratified estimator was 27% greater at 57,717716 ha. Regarding map accuracy, we found several omission errors in the buffer (53.4%) but none (0%) in the undisturbed map class. Similarly, among the 1035 commission errors, the majority (7 4 4) were in the buffer class. The methods presented herein provide a useful tool that can be used to estimate areas of forest disturbance, which many nations must report as part of their commitment to international conventions and treaties. In addition, the information generated can support forest management, enabling the forest sector to monitor stand-replacing forest harvesting over space and time. Numéro de notice : A2022-072 Affiliation des auteurs : non IGN Thématique : FORET/IMAGERIE Nature : Article DOI : 10.1016/j.jag.2021.102663 En ligne : https://doi.org/10.1016/j.jag.2021.102663 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=99437
in International journal of applied Earth observation and geoinformation > vol 106 (February 2022) . - n° 102663[article]Deriving a tree growth model from any existing stand growth model / Quang V. Cao in Canadian Journal of Forest Research, Vol 52 n° 2 (February 2022)
[article]
Titre : Deriving a tree growth model from any existing stand growth model Type de document : Article/Communication Auteurs : Quang V. Cao, Auteur Année de publication : 2022 Article en page(s) : pp 137 - 147 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Vedettes matières IGN] Statistiques
[Termes IGN] désagrégation
[Termes IGN] Etats-Unis
[Termes IGN] méthode des moindres carrés
[Termes IGN] modèle de croissance végétale
[Termes IGN] modélisation de la forêt
[Termes IGN] Pinus taeda
[Termes IGN] régression
[Termes IGN] surface terrièreRésumé : (auteur) In this study, a new method was developed to derive a tree survival and diameter growth model from any existing stand-level model, without the need for individual-tree growth data. Predictions from the derived tree model are constrained to match the number of trees and the basal area per hectare as outputted by the stand model. The tree models derived from three different stand models were evaluated against a tree model, in both unadjusted and disaggregated forms. For the same stand-level model, the derived tree model outperformed its counterpart, the disaggregated tree model. Furthermore, except for one stand model with poor performance, the tree models derived from the remaining two stand models delivered results comparable to those obtained from the unadjusted tree model. The tree model derived from one stand model even performed slightly better than the unadjusted tree model. This result is significant because the coefficients of the unadjusted and disaggregated tree models had to be estimated from tree-level growth data, whereas the derived tree model required no tree growth data at all. The methodology presented in this study should be applicable when there is no ingrowth or recruitment of new trees. Numéro de notice : A2022-311 Affiliation des auteurs : non IGN Autre URL associée : Draft Thématique : FORET/MATHEMATIQUE Nature : Article DOI : 10.1139/cjfr-2021-0106 En ligne : https://doi.org/10.1139/cjfr-2021-0106 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=100408
in Canadian Journal of Forest Research > Vol 52 n° 2 (February 2022) . - pp 137 - 147[article]European-wide forest monitoring substantiate the neccessity for a joint conservation strategy to rescue European ash species (Fraxinus spp.) / Jan-Peter George in Scientific reports, vol 12 (2022)
[article]
Titre : European-wide forest monitoring substantiate the neccessity for a joint conservation strategy to rescue European ash species (Fraxinus spp.) Type de document : Article/Communication Auteurs : Jan-Peter George, Auteur ; Tanja G.M. Sanders, Auteur ; Volkmar Timmermann, Auteur ; Nenad Potočić, Auteur ; Mait Lang, Auteur Année de publication : 2022 Article en page(s) : n° 4764 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] défoliation
[Termes IGN] Europe (géographie politique)
[Termes IGN] Fraxinus angustifolia
[Termes IGN] Fraxinus excelsior
[Termes IGN] mortalité
[Termes IGN] politique de conservation (biodiversité)
[Termes IGN] régression
[Termes IGN] surveillance forestière
[Vedettes matières IGN] Végétation et changement climatiqueRésumé : (auteur) European ash (Fraxinus excelsior) and narrow-leafed ash (F. angustifolia) are keystone forest tree species with a broad ecological amplitude and significant economic importance. Besides global warming both species are currently under significant threat by an invasive fungal pathogen that has been spreading progressively throughout the continent for almost three decades. Ash dieback caused by the ascomycete Hymenoscyphus fraxineus is capable of damaging ash trees of all age classes and often ultimately leads to the death of a tree after years of progressively developing crown defoliation. While studies at national and regional level already suggested rapid decline of ash populations as a result of ash dieback, a comprehensive survey at European level with harmonized crown assessment data across countries could shed more light into the population decline from a pan-European perspective and could also pave the way for a new conservation strategy beyond national boarders. Here we present data from the ICP Forests Level I crown condition monitoring from 27 countries resulting in > 36,000 observations. We found a substantial increase in defoliation and mortality over time indicating that crown defoliation has almost doubled during the last three decades. Hotspots of mortality are currently situated in southern Scandinavia and north-eastern Europe. Overall survival probability after nearly 30 years of infection has already reached a critical value of 0.51, but with large differences among regions (0.20–0.86). Both a Cox proportional hazard model as well as an Aalen additive regression model strongly suggest that survival of ash is significantly lower in locations with excessive water regime and which experienced more extreme precipitation events during the last two decades. Our results underpin the necessity for fast governmental action and joint rescue efforts beyond national borders since overall mean defoliation will likely reach 50% as early as 2030 as suggested by time series forecasting. Numéro de notice : A2022-309 Affiliation des auteurs : non IGN Thématique : FORET Nature : Article DOI : 10.1038/s41598-022-08825-6 Date de publication en ligne : 19/03/2022 En ligne : http://dx.doi.org/10.1038/s41598-022-08825-6 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=100404
in Scientific reports > vol 12 (2022) . - n° 4764[article]Five decades of ground flora changes in a temperate forest: The good, the bad and the ambiguous in biodiversity terms / K.J. Kirby in Forest ecology and management, vol 505 (February-1 2022)
[article]
Titre : Five decades of ground flora changes in a temperate forest: The good, the bad and the ambiguous in biodiversity terms Type de document : Article/Communication Auteurs : K.J. Kirby, Auteur ; D.R. Bazely, Auteur ; E.A. Goldberg, Auteur ; et al., Auteur Année de publication : 2022 Article en page(s) : n° 119896 Note générale : bibliographie Langues : Anglais (eng) Descripteur : [Termes IGN] analyse diachronique
[Termes IGN] biomasse forestière
[Termes IGN] Brachypodium (genre)
[Termes IGN] Cervidae
[Termes IGN] composition floristique
[Termes IGN] dépérissement
[Termes IGN] détection de changement
[Termes IGN] eutrophisation
[Termes IGN] flore forestière
[Termes IGN] forêt tempérée
[Termes IGN] Fraxinus excelsior
[Termes IGN] gestion forestière
[Termes IGN] maladie phytosanitaire
[Termes IGN] richesse floristique
[Termes IGN] Royaume-Uni
[Termes IGN] Tracheophyta
[Vedettes matières IGN] ForesterieRésumé : (auteur) We explore how the ground flora of a temperate woodland (Wytham Woods, southern England) changed in terms of species-richness, cover and biomass over five decades; what the drivers of change were; and possible future change as a consequence of the decline in Fraxinus excelsior as a canopy dominant. Vascular plants were recorded from 164 permanent, 10x10 m plots, distributed as a 141 m grid, in 1974, 1991, 1999, 2012, and 2018. Species presence and frequency/abundance in each plot were estimated and used to model biomass changes. Changes in species-richness, vegetation composition and structure were analysed. Stands opened out by thinning or which became denser through tree growth gained or lost species respectively, particularly non-woodland species. Deer pressure favoured the spread of Brachypodium sylvaticum and reduced Rubus fruticosus. No obvious impacts of climate change, eutrophication or of invasive species were detected in the plot records although other signs suggest these are starting to affect the flora. Just 12 out of 235 species contributed 47% of all species occurrences, 82% of the vegetation cover and 87% of the modelled biomass. We conclude that the ground flora is highly variable over decadal timescales, but the patterns of change observed differ according to the measures used (species richness, cover, biomass, etc). Site level drivers in the short-term swamped effects of slower acting regional/global drivers. Legacy effects were seen in the greater richness of specialists in the older woodland. While some impacts can be mitigated by management, others are largely beyond control at the site level. Numéro de notice : A2022-041 Affiliation des auteurs : non IGN Thématique : BIODIVERSITE/FORET Nature : Article DOI : 10.1016/j.foreco.2021.119896 Date de publication en ligne : 02/12/2021 En ligne : https://doi.org/10.1016/j.foreco.2021.119896 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=99389
in Forest ecology and management > vol 505 (February-1 2022) . - n° 119896[article]Genome-wide evolutionary response of European oaks during the Anthropocene / Dounia Saleh in Evolution letters, vol 6 n° 1 (February 2022)
[article]
Titre : Genome-wide evolutionary response of European oaks during the Anthropocene Type de document : Article/Communication Auteurs : Dounia Saleh, Auteur ; Jun Chen, Auteur ; Jean-Charles Leple, Auteur ; Thibault Leroy, Auteur ; Laura Truffaut, Auteur ; Benjamin Dencausse, Auteur ; Céline Lalanne, Auteur ; Karine Labadie, Auteur ; Isabelle Lesur, Auteur ; Didier Bert, Auteur ; Frédéric Lagane, Auteur ; François Morneau , Auteur ; Jean-Marc Aury, Auteur ; Christophe Plomion, Auteur ; Martin Lascoux, Auteur ; Antoine Kremer, Auteur Année de publication : 2022 Projets : 3-projet - voir note / Article en page(s) : pp 4 - 20 Note générale : bibliographie
This research was supported by the European Research Council through an Advanced Grant (project TREEPEACE # FP7-339728), by France Génomique (project EVOL-OAK, ANR-10-INBS-09-08), and by the French Forest Service (ONF) (INRAE-ONF TREEPEACE contract).Langues : Anglais (eng) Descripteur : [Termes IGN] dix-huitième siècle
[Termes IGN] dix-neuvième siècle
[Termes IGN] France (géographie physique)
[Termes IGN] génétique forestière
[Termes IGN] Quercus sessiliflora
[Termes IGN] vingt-et-unième siècle
[Termes IGN] vingtième siècle
[Vedettes matières IGN] BotaniqueRésumé : (auteur) The pace of tree microevolution during Anthropocene warming is largely unknown. We used a retrospective approach to monitor genomic changes in oak trees since the Little Ice Age (LIA). Allelic frequency changes were assessed from whole-genome pooled sequences for four age-structured cohorts of sessile oak (Quercus petraea) dating back to 1680, in each of three different oak forests in France. The genetic covariances of allelic frequency changes increased between successive time periods, highlighting genome-wide effects of linked selection. We found imprints of parallel linked selection in the three forests during the late LIA, and a shift of selection during more recent time periods of the Anthropocene. The changes in allelic covariances within and between forests mirrored the documented changes in the occurrence of extreme events (droughts and frosts) over the last 300 years. The genomic regions with the highest covariances were enriched in genes involved in plant responses to pathogens and abiotic stresses (temperature and drought). These responses are consistent with the reported sequence of frost (or drought) and disease damage ultimately leading to the oak dieback after extreme events. They provide support for adaptive evolution of long-lived species during recent climatic changes. Although we acknowledge that other sources (e.g., gene flow, generation overlap) may have contributed to temporal covariances of allelic frequency changes, the consistent and correlated response across the three forests lends support to the existence of a systematic driving force such as natural selection. Numéro de notice : A2022-076 Affiliation des auteurs : IGN+Ext (2020- ) Thématique : BIODIVERSITE/FORET Nature : Article nature-HAL : ArtAvecCL-RevueIntern DOI : 10.1002/evl3.269 Date de publication en ligne : 05/01/2022 En ligne : https://doi.org/10.1002/evl3.269 Format de la ressource électronique : URL article Permalink : https://documentation.ensg.eu/index.php?lvl=notice_display&id=99572
in Evolution letters > vol 6 n° 1 (February 2022) . - pp 4 - 20[article]Integrating terrestrial laser scanning and unmanned aerial vehicle photogrammetry to estimate individual tree attributes in managed coniferous forests in Japan / Katsuto Shimizu in International journal of applied Earth observation and geoinformation, vol 106 (February 2022)PermalinkMapping abundance distributions of allergenic tree species in urbanized landscapes: A nation-wide study for Belgium using forest inventory and citizen science data / Sébastien Dujardin in Landscape and Urban Planning, vol 218 (February 2022)PermalinkSurvival time and mortality rate of regeneration in the deep shade of a primeval beech forest / R. Petrovska in European Journal of Forest Research, vol 141 n° 1 (February 2022)PermalinkTree mortality caused by Diplodia shoot blight on Pinus sylvestris and other mediterranean pines / Maria Caballol in Forest ecology and management, vol 505 (February-1 2022)PermalinkConservation zones increase habitat heterogeneity of certified Mediterranean oak woodlands / Teresa Mexia in Forest ecology and management, vol 504 (January-15 2022)PermalinkDrought stress and pests increase defoliation and mortality rates in vulnerable Abies pinsapo forests / Rafael M. Navarro-Cerrillo in Forest ecology and management, vol 504 (January-15 2022)PermalinkForest floor alteration by canopy trees and soil wetness drive regeneration of a spruce-beech forest / Pavel Daněk in Forest ecology and management, vol 504 (January-15 2022)PermalinkAbove-ground biomass estimation in a Mediterranean sparse coppice oak forest using Sentinel-2 data / Fardin Moradi in Annals of forest research, vol 65 n° 1 (January - June 2022)PermalinkAirborne LiDAR and high resolution multispectral data integration in Eucalyptus tree species mapping in an Australian farmscape / Niva Kiran Verma in Geocarto international, vol 37 n° 1 ([01/01/2022])PermalinkApplication of deep learning with stratified K-fold for vegetation species discrimation in a protected mountainous region using Sentinel-2 image / Efosa Gbenga Adagbasa in Geocarto international, vol 37 n° 1 ([01/01/2022])Permalink